RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 CHMP3Q9Y3E7 222 aa21.97■■□□□ 1.11
SPTBN4-204ENST00000392025 SOX12O15370 315 aa21.96■■□□□ 1.11
SPTBN4-204ENST00000392025 TPM2P07951 284 aa21.96■■□□□ 1.11
SPTBN4-204ENST00000392025 STK11IPQ8N1F8 1099 aa21.96■■□□□ 1.11
SPTBN4-204ENST00000392025 TIMELESSQ9UNS1 1208 aa21.96■■□□□ 1.11
SPTBN4-204ENST00000392025 RUFY1Q96T51 708 aa21.95■■□□□ 1.1
SPTBN4-204ENST00000392025 EID1Q9Y6B2 187 aa21.95■■□□□ 1.1
SPTBN4-204ENST00000392025 IPO7O95373 1038 aaKnown RBP21.94■■□□□ 1.1
SPTBN4-204ENST00000392025 DIAPH3Q9NSV4 1193 aa21.94■■□□□ 1.1
SPTBN4-204ENST00000392025 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
SPTBN4-204ENST00000392025 FAM43AQ8N2R8 423 aa21.93■■□□□ 1.1
SPTBN4-204ENST00000392025 ZNF330Q9Y3S2 320 aaPredicted RBP21.93■■□□□ 1.1
SPTBN4-204ENST00000392025 MARCH6O60337 910 aa21.92■■□□□ 1.1
SPTBN4-204ENST00000392025 AMOTL1Q8IY63 956 aa21.92■■□□□ 1.1
SPTBN4-204ENST00000392025 FAM13BQ9NYF5 915 aa21.91■■□□□ 1.1
SPTBN4-204ENST00000392025 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
SPTBN4-204ENST00000392025 ROCK2O75116 1388 aaKnown RBP21.91■■□□□ 1.1
SPTBN4-204ENST00000392025 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
SPTBN4-204ENST00000392025 VPS53Q5VIR6 699 aa21.91■■□□□ 1.1
SPTBN4-204ENST00000392025 CCDC9Q9Y3X0 531 aaKnown RBP21.9■■□□□ 1.1
SPTBN4-204ENST00000392025 GTF2E1P29083 439 aaPredicted RBP21.89■■□□□ 1.1
SPTBN4-204ENST00000392025 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.1
SPTBN4-204ENST00000392025 TRIM6-TRIM34B2RNG4 842 aa21.89■■□□□ 1.09
SPTBN4-204ENST00000392025 MLECQ14165 292 aa21.89■■□□□ 1.09
SPTBN4-204ENST00000392025 CCAR2Q8N163 923 aaKnown RBP21.88■■□□□ 1.09
SPTBN4-204ENST00000392025 H0YHG0 523 aa21.88■■□□□ 1.09
SPTBN4-204ENST00000392025 USP8P40818 1118 aa21.87■■□□□ 1.09
SPTBN4-204ENST00000392025 ERCC4Q92889 916 aaPredicted RBP21.87■■□□□ 1.09
SPTBN4-204ENST00000392025 FANCIQ9NVI1 1328 aa21.87■■□□□ 1.09
SPTBN4-204ENST00000392025 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
SPTBN4-204ENST00000392025 BECN2A8MW95 431 aa21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 TPD52L1Q16890 204 aaPredicted RBP21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 TSHZ2Q9NRE2 1034 aa21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 PATL2C9JE40 543 aaKnown RBP21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 RALBP1Q15311 655 aa21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 TRIM34Q9BYJ4 488 aa21.86■■□□□ 1.09
SPTBN4-204ENST00000392025 NOL10Q9BSC4 688 aaKnown RBP21.85■■□□□ 1.09
SPTBN4-204ENST00000392025 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
SPTBN4-204ENST00000392025 AKAP17AQ02040 695 aaKnown RBP21.84■■□□□ 1.09
SPTBN4-204ENST00000392025 ANKRD20A12PQ8NF67 263 aa21.84■■□□□ 1.09
SPTBN4-204ENST00000392025 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
SPTBN4-204ENST00000392025 HOOK1Q9UJC3 728 aaKnown RBP21.83■■□□□ 1.08
SPTBN4-204ENST00000392025 HMGN5P82970 282 aaKnown RBP21.82■■□□□ 1.08
SPTBN4-204ENST00000392025 INCENPQ9NQS7 918 aa21.81■■□□□ 1.08
SPTBN4-204ENST00000392025 MYO6Q9UM54 1294 aa21.81■■□□□ 1.08
SPTBN4-204ENST00000392025 DDX49Q9Y6V7 483 aaKnown RBP21.81■■□□□ 1.08
SPTBN4-204ENST00000392025 SF3A1Q15459 793 aaKnown RBP21.81■■□□□ 1.08
SPTBN4-204ENST00000392025 UACAQ9BZF9 1416 aa21.81■■□□□ 1.08
SPTBN4-204ENST00000392025 NEXNQ0ZGT2 675 aa21.81■■□□□ 1.08
SPTBN4-204ENST00000392025 U2AF1L5P0DN76 240 aaPredicted RBP21.8■■□□□ 1.08
SPTBN4-204ENST00000392025 U2AF1Q01081 240 aaKnown RBP eCLIP21.8■■□□□ 1.08
SPTBN4-204ENST00000392025 STK26Q9P289 416 aa21.8■■□□□ 1.08
SPTBN4-204ENST00000392025 CAGE1Q8TC20 777 aa21.8■■□□□ 1.08
SPTBN4-204ENST00000392025 CTDP1Q9Y5B0 961 aaPredicted RBP21.8■■□□□ 1.08
SPTBN4-204ENST00000392025 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
SPTBN4-204ENST00000392025 LEKR1Q6ZMV7 388 aa21.79■■□□□ 1.08
SPTBN4-204ENST00000392025 ZRSR2Q15696 482 aaKnown RBP21.79■■□□□ 1.08
SPTBN4-204ENST00000392025 APBB1O00213 710 aa21.78■■□□□ 1.08
SPTBN4-204ENST00000392025 FMN1Q68DA7 1419 aa21.78■■□□□ 1.08
SPTBN4-204ENST00000392025 CREBRFQ8IUR6 639 aa21.77■■□□□ 1.08
SPTBN4-204ENST00000392025 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.08
SPTBN4-204ENST00000392025 HOMER1Q86YM7 354 aa21.77■■□□□ 1.07
SPTBN4-204ENST00000392025 GOLGA6L7A0A1B0GV03 622 aa21.76■■□□□ 1.07
SPTBN4-204ENST00000392025 TSPYL1Q9H0U9 437 aa21.76■■□□□ 1.07
SPTBN4-204ENST00000392025 H3BQV1 296 aa21.76■■□□□ 1.07
SPTBN4-204ENST00000392025 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
SPTBN4-204ENST00000392025 DHX8Q14562 1220 aaKnown RBP21.75■■□□□ 1.07
SPTBN4-204ENST00000392025 PES1O00541 588 aaKnown RBP21.75■■□□□ 1.07
SPTBN4-204ENST00000392025 SYNE3Q6ZMZ3 975 aa21.75■■□□□ 1.07
SPTBN4-204ENST00000392025 SETD5Q9C0A6 1442 aa21.74■■□□□ 1.07
SPTBN4-204ENST00000392025 RRP9O43818 475 aaKnown RBP21.74■■□□□ 1.07
SPTBN4-204ENST00000392025 CPLX2Q6PUV4 134 aaKnown RBP21.74■■□□□ 1.07
SPTBN4-204ENST00000392025 MFAP1P55081 439 aaKnown RBP21.74■■□□□ 1.07
SPTBN4-204ENST00000392025 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
SPTBN4-204ENST00000392025 GGT6Q6P531 493 aa21.74■■□□□ 1.07
SPTBN4-204ENST00000392025 AMPHP49418 695 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 ZNF592Q92610 1267 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 CCDC47Q96A33 483 aaKnown RBP21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 NEFHP12036 1026 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 PDE3BQ13370 1112 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 SMC4Q9NTJ3 1288 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 ANKRD30AQ9BXX3 1397 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 CCP110O43303 1012 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 DEF6Q9H4E7 631 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 MNS1Q8NEH6 495 aa21.73■■□□□ 1.07
SPTBN4-204ENST00000392025 CCDC39Q9UFE4 941 aa21.72■■□□□ 1.07
SPTBN4-204ENST00000392025 NGDNQ8NEJ9 315 aaKnown RBP21.72■■□□□ 1.07
SPTBN4-204ENST00000392025 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
SPTBN4-204ENST00000392025 DYDC1Q8WWB3 177 aa21.71■■□□□ 1.07
SPTBN4-204ENST00000392025 FAM161AQ3B820 660 aa21.7■■□□□ 1.06
SPTBN4-204ENST00000392025 CENPQQ7L2Z9 268 aaPredicted RBP21.7■■□□□ 1.06
SPTBN4-204ENST00000392025 CUX2O14529 1486 aa21.7■■□□□ 1.06
SPTBN4-204ENST00000392025 WASHC2AQ641Q2 1341 aa21.7■■□□□ 1.06
SPTBN4-204ENST00000392025 TOMM22Q9NS69 142 aa21.69■■□□□ 1.06
SPTBN4-204ENST00000392025 RSPH4AQ5TD94 716 aa21.69■■□□□ 1.06
SPTBN4-204ENST00000392025 CCDC173Q0VFZ6 552 aa21.69■■□□□ 1.06
SPTBN4-204ENST00000392025 PDE4CQ08493 712 aa21.69■■□□□ 1.06
SPTBN4-204ENST00000392025 FAM184AQ8NB25 1140 aa21.68■■□□□ 1.06
SPTBN4-204ENST00000392025 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms