RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 PRIM1P49642 420 aaKnown RBP2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 SRPK2P78362 688 aaKnown RBP2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 MAP3K9P80192 1104 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 MDM2Q00987 491 aaPredicted RBP2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 DSG2Q14126 1118 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 CCDC27Q2M243 656 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 RSPH4AQ5TD94 716 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 REM2Q8IYK8 340 aaPredicted RBP2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 DDX12PQ92771 950 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 PHOX2BQ99453 314 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 BEGAINQ9BUH8 593 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 TMUB1Q9BVT8 246 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 MYT1LQ9UL68 1186 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 AMOTL2Q9Y2J4 779 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 CCDC61Q9Y6R9 512 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 TBC1D12O60347 775 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 RFC5P40937 340 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 KCNA1Q09470 495 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 HIC1Q14526 733 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 PDIA6Q15084 440 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 FAM161AQ3B820 660 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 BANK1Q8NDB2 785 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 NLRP7Q8WX94 980 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 VRTNQ9H8Y1 702 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 IVNS1ABPQ9Y6Y0 642 aa2.35□□□□□ -2.03
RNU1-78P-201ENST00000391248 SPDYE5A6NIY4 337 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 CSB-PGBD3P0DP91 1061 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 TMEM259Q4ZIN3 620 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 DPY19L2Q6NUT2 758 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 PLPP6Q8IY26 295 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 GLMNQ92990 594 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 KIF12Q96FN5 646 aa2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU1-78P-201ENST00000391248 PATL2C9JE40 543 aaKnown RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 PPM1GO15355 546 aaPredicted RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 LMOD1P29536 600 aaPredicted RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 PTGDRQ13258 359 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 MYSM1Q5VVJ2 828 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 PBXIP1Q96AQ6 731 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 AKT1S1Q96B36 256 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 POLR3GLQ9BT43 218 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 TBC1D2Q9BYX2 928 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 GPCPD1Q9NPB8 672 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 NPDC1Q9NQX5 325 aaPredicted RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 IGSF5Q9NSI5 407 aa2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 KIAA1522Q9P206 1035 aaPredicted RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 TFIP11Q9UBB9 837 aaKnown RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 PPP1R1BQ9UD71 204 aaPredicted RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 FARP1Q9Y4F1 1045 aaPredicted RBP2.33□□□□□ -2.04
RNU1-78P-201ENST00000391248 RBM47A0AV96 593 aaKnown RBP2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 CLCN1P35523 988 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 GOLGA2Q08379 1002 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 CFAP70Q5T0N1 1121 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 SND1Q7KZF4 910 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 RIC3Q7Z5B4 369 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 MTMR14Q8NCE2 650 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 ADAMTS19Q8TE59 1207 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 UPF1Q92900 1129 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 MRRFQ96E11 262 aaKnown RBP2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 LIMD1Q9UGP4 676 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 TBC1D2BQ9UPU7 963 aa2.32□□□□□ -2.04
RNU1-78P-201ENST00000391248 TMEM88BA6NKF7 163 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 PITPNM1O00562 1244 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 SMARCA5O60264 1052 aaPredicted RBP2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 AP1G2O75843 785 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 PTGER2P43116 358 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 CLK2P49760 499 aaKnown RBP2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 FOXK1P85037 733 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 CSPP1Q1MSJ5 1256 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 NOM1Q5C9Z4 860 aaKnown RBP2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 RTL5Q5HYW3 569 aaPredicted RBP2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 WWC1Q8IX03 1113 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 ZNF710Q8N1W2 664 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 TMC2Q8TDI7 906 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 PPP1R12CQ9BZL4 782 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 FAM217BQ9NTX9 383 aaPredicted RBP2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 CADPSQ9ULU8 1353 aa2.31□□□□□ -2.04
RNU1-78P-201ENST00000391248 C2orf72A6NCS6 295 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 PALM3A6NDB9 673 aaPredicted RBP2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 NDUFV2P19404 249 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 PPP2R2DQ66LE6 453 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 TXNDC2Q86VQ3 553 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 RBM33Q96EV2 1170 aaKnown RBP2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 DRC1Q96MC2 740 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 TMEM106CQ9BVX2 250 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 CWC22Q9HCG8 908 aaKnown RBP2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 PRM3Q9NNZ6 103 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 TRPC6Q9Y210 931 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 PCDHB15Q9Y5E8 787 aa2.3□□□□□ -2.04
RNU1-78P-201ENST00000391248 EVI5O60447 810 aa2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 ZNF16P17020 682 aaPredicted RBP2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 TAGLNQ01995 201 aaKnown RBP2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 VAC14Q08AM6 782 aa2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 QPCTQ16769 361 aa2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 CCDC125Q86Z20 511 aa2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 DHX37Q8IY37 1157 aaKnown RBP2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 SPIRE2Q8WWL2 714 aa2.29□□□□□ -2.04
RNU1-78P-201ENST00000391248 SIRT1Q96EB6 747 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms