RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RIMBP2O15034 1052 aa5.73□□□□□ -1.49
TRAJ40-201ENST00000390497 POTEIP0CG38 1075 aa5.73□□□□□ -1.49
TRAJ40-201ENST00000390497 PRIM1P49642 420 aaKnown RBP5.73□□□□□ -1.49
TRAJ40-201ENST00000390497 ZSWIM6Q9HCJ5 1215 aa5.73□□□□□ -1.49
TRAJ40-201ENST00000390497 KDM4FA0A1W2PPD8 638 aa5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 PLEKHG3A1L390 1219 aa5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 FLIIQ13045 1269 aa5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 DOK7Q18PE1 504 aa5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 SP7Q8TDD2 431 aaPredicted RBP5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 RBM33Q96EV2 1170 aaKnown RBP5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 RSPH6AQ9H0K4 717 aa5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 GPCPD1Q9NPB8 672 aa5.72□□□□□ -1.49
TRAJ40-201ENST00000390497 FOSBP53539 338 aa5.71□□□□□ -1.5
TRAJ40-201ENST00000390497 C6orf132Q5T0Z8 1188 aa5.71□□□□□ -1.5
TRAJ40-201ENST00000390497 GIGYF2Q6Y7W6 1299 aaKnown RBP5.71□□□□□ -1.5
TRAJ40-201ENST00000390497 ZDHHC16Q969W1 377 aa5.71□□□□□ -1.5
TRAJ40-201ENST00000390497 TMUB1Q9BVT8 246 aa5.71□□□□□ -1.5
TRAJ40-201ENST00000390497 RBM27Q9P2N5 1060 aaKnown RBP5.71□□□□□ -1.5
TRAJ40-201ENST00000390497 PSDA5PKW4 1024 aaPredicted RBP5.7□□□□□ -1.5
TRAJ40-201ENST00000390497 PCMTD1Q96MG8 357 aaPredicted RBP5.7□□□□□ -1.5
TRAJ40-201ENST00000390497 SSTR3P32745 418 aaPredicted RBP5.69□□□□□ -1.5
TRAJ40-201ENST00000390497 MAMSTRQ6ZN01 415 aa5.69□□□□□ -1.5
TRAJ40-201ENST00000390497 DIXDC1Q155Q3 683 aa5.68□□□□□ -1.5
TRAJ40-201ENST00000390497 TSR1Q2NL82 804 aaKnown RBP5.68□□□□□ -1.5
TRAJ40-201ENST00000390497 HOMEZQ8IX15 550 aa5.68□□□□□ -1.5
TRAJ40-201ENST00000390497 ZNF454Q8N9F8 522 aa5.68□□□□□ -1.5
TRAJ40-201ENST00000390497 CDHR5Q9HBB8 845 aa5.68□□□□□ -1.5
TRAJ40-201ENST00000390497 MS4A1P11836 297 aa5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 MDM2Q00987 491 aaPredicted RBP5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 SKIV2LQ15477 1246 aaKnown RBP5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 SH3D19Q5HYK7 790 aa5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 ZNF710Q8N1W2 664 aa5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 TTC13Q8NBP0 860 aa5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 RBM46Q8TBY0 533 aaKnown RBP5.67□□□□□ -1.5
TRAJ40-201ENST00000390497 SUPT5HO00267 1087 aaKnown RBP5.66□□□□□ -1.5
TRAJ40-201ENST00000390497 PRSS12P56730 875 aa5.66□□□□□ -1.5
TRAJ40-201ENST00000390497 METTL3Q86U44 580 aaKnown RBP5.66□□□□□ -1.5
TRAJ40-201ENST00000390497 PXYLP1Q8TE99 480 aa5.66□□□□□ -1.5
TRAJ40-201ENST00000390497 REPIN1Q9BWE0 567 aaKnown RBP5.66□□□□□ -1.5
TRAJ40-201ENST00000390497 SCUBE2Q9NQ36 999 aa5.66□□□□□ -1.5
TRAJ40-201ENST00000390497 SNPHO15079 494 aa5.65□□□□□ -1.5
TRAJ40-201ENST00000390497 ARSIQ5FYB1 569 aa5.65□□□□□ -1.5
TRAJ40-201ENST00000390497 GPR153Q6NV75 609 aa5.65□□□□□ -1.5
TRAJ40-201ENST00000390497 ADGRG1Q9Y653 693 aa5.65□□□□□ -1.5
TRAJ40-201ENST00000390497 NUDT7P0C024 238 aa5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 PPP4R3BQ5MIZ7 849 aa5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 PADI6Q6TGC4 694 aa5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 CDCA7LQ96GN5 454 aa5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 PHOX2BQ99453 314 aa5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 BEGAINQ9BUH8 593 aa5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 FAM217BQ9NTX9 383 aaPredicted RBP5.64□□□□□ -1.51
TRAJ40-201ENST00000390497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.63□□□□□ -1.51
TRAJ40-201ENST00000390497 HOXB3P14651 431 aaPredicted RBP5.63□□□□□ -1.51
TRAJ40-201ENST00000390497 ADAM33Q9BZ11 813 aa5.63□□□□□ -1.51
TRAJ40-201ENST00000390497 ONECUT3O60422 494 aaPredicted RBP5.62□□□□□ -1.51
TRAJ40-201ENST00000390497 PTPREP23469 700 aa5.62□□□□□ -1.51
TRAJ40-201ENST00000390497 SULF1Q8IWU6 871 aa5.62□□□□□ -1.51
TRAJ40-201ENST00000390497 BCL2L12Q9HB09 334 aa5.62□□□□□ -1.51
TRAJ40-201ENST00000390497 ATP1B4Q9UN42 357 aaPredicted RBP5.62□□□□□ -1.51
TRAJ40-201ENST00000390497 A6NJR5 290 aa5.61□□□□□ -1.51
TRAJ40-201ENST00000390497 PACS2Q86VP3 889 aa5.61□□□□□ -1.51
TRAJ40-201ENST00000390497 FAM161AQ3B820 660 aa5.6□□□□□ -1.51
TRAJ40-201ENST00000390497 RSPH4AQ5TD94 716 aa5.6□□□□□ -1.51
TRAJ40-201ENST00000390497 EYA1Q99502 592 aa5.6□□□□□ -1.51
TRAJ40-201ENST00000390497 LHX6Q9UPM6 363 aa5.6□□□□□ -1.51
TRAJ40-201ENST00000390497 PPP1R3GB7ZBB8 358 aa5.59□□□□□ -1.51
TRAJ40-201ENST00000390497 KHSRPQ92945 711 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRAJ40-201ENST00000390497 KCNH8Q96L42 1107 aa5.59□□□□□ -1.51
TRAJ40-201ENST00000390497 RCCD1A6NED2 376 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 NBPF26B4DH59 902 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 POTEJP0CG39 1038 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 HOXB1P14653 301 aaPredicted RBP5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 DNAJB2P25686 324 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 GJA5P36382 358 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 TUSC1Q2TAM9 212 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 TMEM259Q4ZIN3 620 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 MYSM1Q5VVJ2 828 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 BANK1Q8NDB2 785 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 TBC1D2Q9BYX2 928 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 POLR3EQ9NVU0 708 aa5.58□□□□□ -1.52
TRAJ40-201ENST00000390497 UBTFP17480 764 aaKnown RBP5.57□□□□□ -1.52
TRAJ40-201ENST00000390497 PROCA1Q8NCQ7 364 aaPredicted RBP5.57□□□□□ -1.52
TRAJ40-201ENST00000390497 TRIM6-TRIM34B2RNG4 842 aa5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 POTEB2H3BUK9 544 aa5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 RAD21O60216 631 aa5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 CLK2P49760 499 aaKnown RBP5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 NUDT18Q6ZVK8 323 aa5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 NUTM1Q86Y26 1132 aa5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 TATDN2Q93075 761 aa5.56□□□□□ -1.52
TRAJ40-201ENST00000390497 SPDYE5A6NIY4 337 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 TRAK2O60296 914 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 CD46P15529 392 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 COL9A1P20849 921 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 HDGFP51858 240 aaKnown RBP5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 RIC3Q7Z5B4 369 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 TSKSQ9UJT2 592 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 PNMA3Q9UL41 463 aa5.55□□□□□ -1.52
TRAJ40-201ENST00000390497 APBB1O00213 710 aa5.54□□□□□ -1.52
TRAJ40-201ENST00000390497 SPTLC1O15269 473 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms