RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
PTPRT-205ENST00000373193 FOSBP53539 338 aa11.4□□□□□ -0.58
PTPRT-205ENST00000373193 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.59
PTPRT-205ENST00000373193 NAP1L1P55209 391 aaKnown RBP11.39□□□□□ -0.59
PTPRT-205ENST00000373193 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
PTPRT-205ENST00000373193 KTN1Q86UP2 1357 aaKnown RBP11.39□□□□□ -0.59
PTPRT-205ENST00000373193 TPM2P07951 284 aa11.39□□□□□ -0.59
PTPRT-205ENST00000373193 TMF1P82094 1093 aa11.39□□□□□ -0.59
PTPRT-205ENST00000373193 TTLL5Q6EMB2 1281 aa11.38□□□□□ -0.59
PTPRT-205ENST00000373193 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
PTPRT-205ENST00000373193 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
PTPRT-205ENST00000373193 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRT-205ENST00000373193 MNS1Q8NEH6 495 aa11.38□□□□□ -0.59
PTPRT-205ENST00000373193 CCER2I3L3R5 266 aa11.37□□□□□ -0.59
PTPRT-205ENST00000373193 RILPL2Q969X0 211 aa11.37□□□□□ -0.59
PTPRT-205ENST00000373193 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
PTPRT-205ENST00000373193 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
PTPRT-205ENST00000373193 FAM184AQ8NB25 1140 aa11.36□□□□□ -0.59
PTPRT-205ENST00000373193 CWC15Q9P013 229 aaKnown RBP11.36□□□□□ -0.59
PTPRT-205ENST00000373193 TSPYL1Q9H0U9 437 aa11.36□□□□□ -0.59
PTPRT-205ENST00000373193 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
PTPRT-205ENST00000373193 SKOR2Q2VWA4 1001 aaPredicted RBP11.35□□□□□ -0.59
PTPRT-205ENST00000373193 HSP90B2PQ58FF3 399 aa11.35□□□□□ -0.59
PTPRT-205ENST00000373193 BRPF3Q9ULD4 1205 aa11.35□□□□□ -0.59
PTPRT-205ENST00000373193 ARGLU1Q9NWB6 273 aaPredicted RBP11.35□□□□□ -0.59
PTPRT-205ENST00000373193 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
PTPRT-205ENST00000373193 IPO7O95373 1038 aaKnown RBP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 PDE4AP27815 886 aa11.34□□□□□ -0.59
PTPRT-205ENST00000373193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 CAGE1Q8TC20 777 aa11.34□□□□□ -0.59
PTPRT-205ENST00000373193 MEX3CQ5U5Q3 659 aaKnown RBP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 HMMRO75330 724 aa11.34□□□□□ -0.59
PTPRT-205ENST00000373193 STK26Q9P289 416 aa11.33□□□□□ -0.59
PTPRT-205ENST00000373193 PLIN1O60240 522 aa11.33□□□□□ -0.6
PTPRT-205ENST00000373193 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
PTPRT-205ENST00000373193 PDILTQ8N807 584 aa11.32□□□□□ -0.6
PTPRT-205ENST00000373193 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
PTPRT-205ENST00000373193 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
PTPRT-205ENST00000373193 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
PTPRT-205ENST00000373193 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 FOXD1Q16676 465 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 RAD21O60216 631 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 RBM25P49756 843 aaKnown RBP11.3□□□□□ -0.6
PTPRT-205ENST00000373193 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 CDR1P51861 262 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
PTPRT-205ENST00000373193 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 RRP7AQ9Y3A4 280 aaKnown RBP11.29□□□□□ -0.6
PTPRT-205ENST00000373193 ATP6V1DQ9Y5K8 247 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 TCEAL9Q9UHQ7 104 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 RNF214Q8ND24 703 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 AXDND1Q5T1B0 1012 aaPredicted RBP11.29□□□□□ -0.6
PTPRT-205ENST00000373193 ANKRD20A12PQ8NF67 263 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 G3V3G9 751 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.61
PTPRT-205ENST00000373193 STK11IPQ8N1F8 1099 aa11.27□□□□□ -0.61
PTPRT-205ENST00000373193 MPNDQ8N594 471 aa11.27□□□□□ -0.61
PTPRT-205ENST00000373193 CCDC39Q9UFE4 941 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 SASS6Q6UVJ0 657 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 PLEKHD1A6NEE1 506 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 KDM4AO75164 1064 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
PTPRT-205ENST00000373193 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
PTPRT-205ENST00000373193 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
PTPRT-205ENST00000373193 SPAG9O60271 1321 aaKnown RBP11.25□□□□□ -0.61
PTPRT-205ENST00000373193 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
PTPRT-205ENST00000373193 ODF2Q5BJF6 829 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 ROCK2O75116 1388 aaKnown RBP11.24□□□□□ -0.61
PTPRT-205ENST00000373193 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 FAM193AP78312 1265 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 TRIM29Q14134 588 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 CENPQQ7L2Z9 268 aaPredicted RBP11.23□□□□□ -0.61
PTPRT-205ENST00000373193 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
PTPRT-205ENST00000373193 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
PTPRT-205ENST00000373193 HDGFL2Q7Z4V5 671 aaPredicted RBP11.23□□□□□ -0.61
PTPRT-205ENST00000373193 CT47B1P0C2W7 299 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms