RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 DPF3Q92784 378 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 FAM193AP78312 1265 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 KDM4CQ9H3R0 1056 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 STAG3Q9UJ98 1225 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 ISY1Q9ULR0 285 aaKnown RBP4.16□□□□□ -1.74
SOCS4-201ENST00000339298 AP1G2O75843 785 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 FBXW10Q5XX13 1052 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 ANKRD62A6NC57 917 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 HRCP23327 699 aa4.15□□□□□ -1.74
SOCS4-201ENST00000339298 SMARCA5O60264 1052 aaPredicted RBP4.15□□□□□ -1.74
SOCS4-201ENST00000339298 CNGA1P29973 690 aa4.15□□□□□ -1.74
SOCS4-201ENST00000339298 SRPK2P78362 688 aaKnown RBP4.15□□□□□ -1.74
SOCS4-201ENST00000339298 NAP1L2Q9ULW6 460 aaPredicted RBP4.15□□□□□ -1.74
SOCS4-201ENST00000339298 PPARGC1BQ86YN6 1023 aaKnown RBP4.15□□□□□ -1.75
SOCS4-201ENST00000339298 BCCIPQ9P287 314 aaKnown RBP eCLIP4.15□□□□□ -1.75
SOCS4-201ENST00000339298 KDM4AO75164 1064 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 E2F4Q16254 413 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 CHMP4BP1P59074 171 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 KCNV2Q8TDN2 545 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 CHMP7Q8WUX9 453 aaPredicted RBP4.14□□□□□ -1.75
SOCS4-201ENST00000339298 MAP3K9P80192 1104 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 WDR43Q15061 677 aaKnown RBP eCLIP4.14□□□□□ -1.75
SOCS4-201ENST00000339298 CT47B1P0C2W7 299 aaPredicted RBP4.14□□□□□ -1.75
SOCS4-201ENST00000339298 CHMP4BQ9H444 224 aaKnown RBP4.14□□□□□ -1.75
SOCS4-201ENST00000339298 FGD1P98174 961 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 LMOD3Q0VAK6 560 aa4.14□□□□□ -1.75
SOCS4-201ENST00000339298 VGFO15240 615 aaPredicted RBP4.13□□□□□ -1.75
SOCS4-201ENST00000339298 ZC3H15Q8WU90 426 aaKnown RBP4.13□□□□□ -1.75
SOCS4-201ENST00000339298 ANO2Q9NQ90 1003 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 IQSEC3Q9UPP2 1182 aaPredicted RBP4.13□□□□□ -1.75
SOCS4-201ENST00000339298 CC2D1BQ5T0F9 858 aaKnown RBP4.13□□□□□ -1.75
SOCS4-201ENST00000339298 NLRP7Q8WX94 980 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 PPP1R14AQ96A00 147 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 GORABQ5T7V8 394 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 NUTM1Q86Y26 1132 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 DDX12PQ92771 950 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 DNAJC2Q99543 621 aaKnown RBP4.13□□□□□ -1.75
SOCS4-201ENST00000339298 C9orf131Q5VYM1 1079 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 GPATCH11Q8N954 259 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 DNAJA1P31689 397 aaKnown RBP4.13□□□□□ -1.75
SOCS4-201ENST00000339298 RETREG2Q8NC44 543 aa4.13□□□□□ -1.75
SOCS4-201ENST00000339298 LMOD1P29536 600 aaPredicted RBP4.12□□□□□ -1.75
SOCS4-201ENST00000339298 FLIIQ13045 1269 aa4.12□□□□□ -1.75
SOCS4-201ENST00000339298 LMNB1P20700 586 aa4.12□□□□□ -1.75
SOCS4-201ENST00000339298 HMGB1P1B2RPK0 211 aaPredicted RBP4.12□□□□□ -1.75
SOCS4-201ENST00000339298 BRD3Q15059 726 aa4.12□□□□□ -1.75
SOCS4-201ENST00000339298 LOC105371045A0A1W2PR82 267 aa4.12□□□□□ -1.75
SOCS4-201ENST00000339298 MPHOSPH10O00566 681 aaKnown RBP4.12□□□□□ -1.75
SOCS4-201ENST00000339298 MKRN3Q13064 507 aaKnown RBP4.12□□□□□ -1.75
SOCS4-201ENST00000339298 MDM2Q00987 491 aaPredicted RBP4.12□□□□□ -1.75
SOCS4-201ENST00000339298 MKNK1Q9BUB5 465 aa4.12□□□□□ -1.75
SOCS4-201ENST00000339298 G3BP2Q9UN86 482 aaKnown RBP4.12□□□□□ -1.75
SOCS4-201ENST00000339298 RDH13Q8NBN7 331 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 GIPC2Q8TF65 315 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 GOLGA6L22H0YM25 854 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 CHMP3Q9Y3E7 222 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 XPCQ01831 940 aaPredicted RBP4.11□□□□□ -1.75
SOCS4-201ENST00000339298 GDPD2Q9HCC8 539 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 ZBTB12Q9Y330 459 aaPredicted RBP4.11□□□□□ -1.75
SOCS4-201ENST00000339298 HINFPQ9BQA5 517 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 FAM117AQ9C073 453 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 IVNS1ABPQ9Y6Y0 642 aa4.11□□□□□ -1.75
SOCS4-201ENST00000339298 FAM13BQ9NYF5 915 aa4.1□□□□□ -1.75
SOCS4-201ENST00000339298 U2SURPO15042 1029 aaKnown RBP4.1□□□□□ -1.75
SOCS4-201ENST00000339298 BCL2L13Q9BXK5 485 aa4.1□□□□□ -1.75
SOCS4-201ENST00000339298 SPINK5Q9NQ38 1064 aaPredicted RBP4.1□□□□□ -1.75
SOCS4-201ENST00000339298 IGSF3O75054 1194 aa4.1□□□□□ -1.75
SOCS4-201ENST00000339298 ARID4AP29374 1257 aaPredicted RBP4.1□□□□□ -1.75
SOCS4-201ENST00000339298 WWC3Q9ULE0 1092 aa4.1□□□□□ -1.75
SOCS4-201ENST00000339298 PCDHB8Q9UN66 801 aa4.1□□□□□ -1.75
SOCS4-201ENST00000339298 PCDHB13Q9Y5F0 798 aa4.1□□□□□ -1.75
SOCS4-201ENST00000339298 MAP3K7O43318 606 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 MAPK8P45983 427 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 L1TD1Q5T7N2 865 aaKnown RBP4.09□□□□□ -1.75
SOCS4-201ENST00000339298 HS6ST3Q8IZP7 471 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 GOLGA6L6A8MZA4 724 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 TSPY2A6NKD2 308 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 TSPY3P0CV98 308 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 TSPY8P0CW00 308 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 TSPY1Q01534 308 aa4.09□□□□□ -1.75
SOCS4-201ENST00000339298 PEX14O75381 377 aa4.09□□□□□ -1.76
SOCS4-201ENST00000339298 NAP1L1P55209 391 aaKnown RBP4.09□□□□□ -1.76
SOCS4-201ENST00000339298 TMC2Q8TDI7 906 aa4.09□□□□□ -1.76
SOCS4-201ENST00000339298 CPLX3Q8WVH0 158 aa4.09□□□□□ -1.76
SOCS4-201ENST00000339298 TANGO6Q9C0B7 1094 aa4.09□□□□□ -1.76
SOCS4-201ENST00000339298 SLC4A10Q6U841 1118 aa4.08□□□□□ -1.76
SOCS4-201ENST00000339298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.08□□□□□ -1.76
SOCS4-201ENST00000339298 DDRGK1Q96HY6 314 aa4.08□□□□□ -1.76
SOCS4-201ENST00000339298 SERPINA10Q9UK55 444 aa4.08□□□□□ -1.76
SOCS4-201ENST00000339298 IRX3P78415 501 aaPredicted RBP4.08□□□□□ -1.76
SOCS4-201ENST00000339298 SMAD5Q99717 465 aaKnown RBP4.08□□□□□ -1.76
SOCS4-201ENST00000339298 GRM1Q13255 1194 aa4.08□□□□□ -1.76
SOCS4-201ENST00000339298 hCG_2014768A0A024R1R8 64 aa4.08□□□□□ -1.76
SOCS4-201ENST00000339298 ERICH4A6NGS2 130 aa4.08□□□□□ -1.76
SOCS4-201ENST00000339298 PPM1FP49593 454 aaPredicted RBP4.08□□□□□ -1.76
SOCS4-201ENST00000339298 PROSER2Q86WR7 435 aaPredicted RBP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 BRPF3Q9ULD4 1205 aa4.07□□□□□ -1.76
SOCS4-201ENST00000339298 PDE4DQ08499 809 aa4.07□□□□□ -1.76
SOCS4-201ENST00000339298 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 DPYSL4O14531 572 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms