RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
ABCA3-201ENST00000301732 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
ABCA3-201ENST00000301732 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.05
ABCA3-201ENST00000301732 MARCH6O60337 910 aa15.33■□□□□ 0.04
ABCA3-201ENST00000301732 COG6Q9Y2V7 657 aa15.33■□□□□ 0.04
ABCA3-201ENST00000301732 GOLGA3Q08378 1498 aa15.33■□□□□ 0.04
ABCA3-201ENST00000301732 IL27Q8NEV9 243 aa15.33■□□□□ 0.04
ABCA3-201ENST00000301732 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
ABCA3-201ENST00000301732 PMFBP1Q8TBY8 1022 aa15.32■□□□□ 0.04
ABCA3-201ENST00000301732 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
ABCA3-201ENST00000301732 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
ABCA3-201ENST00000301732 ROCK2O75116 1388 aaKnown RBP15.32■□□□□ 0.04
ABCA3-201ENST00000301732 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
ABCA3-201ENST00000301732 CENPJQ9HC77 1338 aaPredicted RBP15.3■□□□□ 0.04
ABCA3-201ENST00000301732 PCMTD1Q96MG8 357 aaPredicted RBP15.3■□□□□ 0.04
ABCA3-201ENST00000301732 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
ABCA3-201ENST00000301732 BECN2A8MW95 431 aa15.3■□□□□ 0.04
ABCA3-201ENST00000301732 GOLGA6L19H0YKK7 550 aa15.3■□□□□ 0.04
ABCA3-201ENST00000301732 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
ABCA3-201ENST00000301732 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
ABCA3-201ENST00000301732 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
ABCA3-201ENST00000301732 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
ABCA3-201ENST00000301732 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
ABCA3-201ENST00000301732 SETQ01105 290 aaPredicted RBP15.28■□□□□ 0.04
ABCA3-201ENST00000301732 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
ABCA3-201ENST00000301732 CEP89Q96ST8 783 aa15.28■□□□□ 0.04
ABCA3-201ENST00000301732 ST18O60284 1047 aa15.28■□□□□ 0.04
ABCA3-201ENST00000301732 HOMER1Q86YM7 354 aa15.27■□□□□ 0.04
ABCA3-201ENST00000301732 FAM184AQ8NB25 1140 aa15.27■□□□□ 0.04
ABCA3-201ENST00000301732 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
ABCA3-201ENST00000301732 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.03
ABCA3-201ENST00000301732 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.03
ABCA3-201ENST00000301732 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.03
ABCA3-201ENST00000301732 G3V3G9 751 aa15.24■□□□□ 0.03
ABCA3-201ENST00000301732 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
ABCA3-201ENST00000301732 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
ABCA3-201ENST00000301732 DDX11L8A8MPP1 907 aa15.24■□□□□ 0.03
ABCA3-201ENST00000301732 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
ABCA3-201ENST00000301732 MTMR7Q9Y216 660 aa15.23■□□□□ 0.03
ABCA3-201ENST00000301732 EIF2S2P20042 333 aaKnown RBP15.23■□□□□ 0.03
ABCA3-201ENST00000301732 PHF14O94880 888 aa15.22■□□□□ 0.03
ABCA3-201ENST00000301732 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
ABCA3-201ENST00000301732 STK11IPQ8N1F8 1099 aa15.22■□□□□ 0.03
ABCA3-201ENST00000301732 PLCD4Q9BRC7 762 aa15.22■□□□□ 0.03
ABCA3-201ENST00000301732 VPS37CA5D8V6 355 aaPredicted RBP15.21■□□□□ 0.03
ABCA3-201ENST00000301732 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
ABCA3-201ENST00000301732 TRAK1Q9UPV9 953 aa15.21■□□□□ 0.03
ABCA3-201ENST00000301732 BICD2Q8TD16 824 aa15.2■□□□□ 0.02
ABCA3-201ENST00000301732 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
ABCA3-201ENST00000301732 CSPP1Q1MSJ5 1256 aa15.2■□□□□ 0.02
ABCA3-201ENST00000301732 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
ABCA3-201ENST00000301732 NAP1L1P55209 391 aaKnown RBP15.19■□□□□ 0.02
ABCA3-201ENST00000301732 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
ABCA3-201ENST00000301732 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
ABCA3-201ENST00000301732 TSR1Q2NL82 804 aaKnown RBP15.19■□□□□ 0.02
ABCA3-201ENST00000301732 SPAG9O60271 1321 aaKnown RBP15.19■□□□□ 0.02
ABCA3-201ENST00000301732 RAB3GAP2Q9H2M9 1393 aa15.18■□□□□ 0.02
ABCA3-201ENST00000301732 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
ABCA3-201ENST00000301732 HMMRO75330 724 aa15.18■□□□□ 0.02
ABCA3-201ENST00000301732 APPP05067 770 aa15.18■□□□□ 0.02
ABCA3-201ENST00000301732 FAM43AQ8N2R8 423 aa15.18■□□□□ 0.02
ABCA3-201ENST00000301732 CALRP27797 417 aaKnown RBP15.17■□□□□ 0.02
ABCA3-201ENST00000301732 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
ABCA3-201ENST00000301732 AMPHP49418 695 aa15.16■□□□□ 0.02
ABCA3-201ENST00000301732 PANK3Q9H999 370 aa15.16■□□□□ 0.02
ABCA3-201ENST00000301732 RRP1P56182 461 aaKnown RBP15.16■□□□□ 0.02
ABCA3-201ENST00000301732 NFKBIBQ15653 356 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 PDILTQ8N807 584 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 RALBP1Q15311 655 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 LNPKQ9C0E8 428 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 FYB1O15117 783 aa15.15■□□□□ 0.02
ABCA3-201ENST00000301732 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
ABCA3-201ENST00000301732 SPC24Q8NBT2 197 aa15.14■□□□□ 0.01
ABCA3-201ENST00000301732 APAF1O14727 1248 aa15.13■□□□□ 0.01
ABCA3-201ENST00000301732 SOGA1O94964 1423 aa15.13■□□□□ 0.01
ABCA3-201ENST00000301732 NGDNQ8NEJ9 315 aaKnown RBP15.13■□□□□ 0.01
ABCA3-201ENST00000301732 CCDC34Q96HJ3 373 aa15.12■□□□□ 0.01
ABCA3-201ENST00000301732 PKNOX2Q96KN3 472 aa15.12■□□□□ 0.01
ABCA3-201ENST00000301732 FMNL2Q96PY5 1086 aa15.12■□□□□ 0.01
ABCA3-201ENST00000301732 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
ABCA3-201ENST00000301732 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
ABCA3-201ENST00000301732 AKAP17AQ02040 695 aaKnown RBP15.12■□□□□ 0.01
ABCA3-201ENST00000301732 CENPQQ7L2Z9 268 aaPredicted RBP15.12■□□□□ 0.01
ABCA3-201ENST00000301732 NUP155O75694 1391 aa15.11■□□□□ 0.01
ABCA3-201ENST00000301732 CEBPZQ03701 1054 aaKnown RBP15.11■□□□□ 0.01
ABCA3-201ENST00000301732 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
ABCA3-201ENST00000301732 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
ABCA3-201ENST00000301732 MSH5O43196 834 aa15.11■□□□□ 0.01
ABCA3-201ENST00000301732 PANK1Q8TE04 598 aa15.1■□□□□ 0.01
ABCA3-201ENST00000301732 IBSPP21815 317 aaPredicted RBP15.1■□□□□ 0.01
ABCA3-201ENST00000301732 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
ABCA3-201ENST00000301732 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
ABCA3-201ENST00000301732 GPS2Q13227 327 aa15.09■□□□□ 0.01
ABCA3-201ENST00000301732 KANK1Q14678 1352 aa15.09■□□□□ 0.01
ABCA3-201ENST00000301732 TMX4Q9H1E5 349 aaPredicted RBP15.09■□□□□ 0.01
ABCA3-201ENST00000301732 ATP2B1P20020 1258 aa15.09■□□□□ 0.01
ABCA3-201ENST00000301732 CAVIN1Q6NZI2 390 aaKnown RBP15.09■□□□□ 0.01
ABCA3-201ENST00000301732 MAP7D2Q96T17 732 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms