RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 PHF14O94880 888 aa12.71□□□□□ -0.37
SLF2-201ENST00000238961 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.38
SLF2-201ENST00000238961 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.38
SLF2-201ENST00000238961 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
SLF2-201ENST00000238961 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
SLF2-201ENST00000238961 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
SLF2-201ENST00000238961 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
SLF2-201ENST00000238961 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
SLF2-201ENST00000238961 ZRSR2Q15696 482 aaKnown RBP12.69□□□□□ -0.38
SLF2-201ENST00000238961 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
SLF2-201ENST00000238961 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
SLF2-201ENST00000238961 BECN2A8MW95 431 aa12.69□□□□□ -0.38
SLF2-201ENST00000238961 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
SLF2-201ENST00000238961 ITPRIPQ8IWB1 547 aa12.69□□□□□ -0.38
SLF2-201ENST00000238961 STK31Q9BXU1 1019 aa12.69□□□□□ -0.38
SLF2-201ENST00000238961 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
SLF2-201ENST00000238961 TEX35Q5T0J7 233 aa12.68□□□□□ -0.38
SLF2-201ENST00000238961 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
SLF2-201ENST00000238961 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
SLF2-201ENST00000238961 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 SLC4A10Q6U841 1118 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 NEFHP12036 1026 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 WDR70Q9NW82 654 aa12.67□□□□□ -0.38
SLF2-201ENST00000238961 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
SLF2-201ENST00000238961 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
SLF2-201ENST00000238961 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
SLF2-201ENST00000238961 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
SLF2-201ENST00000238961 EPS15P42566 896 aa12.65□□□□□ -0.38
SLF2-201ENST00000238961 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
SLF2-201ENST00000238961 PLEKHD1A6NEE1 506 aa12.65□□□□□ -0.38
SLF2-201ENST00000238961 TRIM29Q14134 588 aa12.65□□□□□ -0.38
SLF2-201ENST00000238961 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
SLF2-201ENST00000238961 STK26Q9P289 416 aa12.65□□□□□ -0.38
SLF2-201ENST00000238961 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
SLF2-201ENST00000238961 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
SLF2-201ENST00000238961 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
SLF2-201ENST00000238961 MIER1Q8N108 512 aa12.64□□□□□ -0.39
SLF2-201ENST00000238961 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
SLF2-201ENST00000238961 NOM1Q5C9Z4 860 aaKnown RBP12.63□□□□□ -0.39
SLF2-201ENST00000238961 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
SLF2-201ENST00000238961 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
SLF2-201ENST00000238961 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
SLF2-201ENST00000238961 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
SLF2-201ENST00000238961 H0YHG0 523 aa12.62□□□□□ -0.39
SLF2-201ENST00000238961 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
SLF2-201ENST00000238961 OFD1O75665 1012 aa12.61□□□□□ -0.39
SLF2-201ENST00000238961 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
SLF2-201ENST00000238961 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
SLF2-201ENST00000238961 TCERG1O14776 1098 aaKnown RBP12.61□□□□□ -0.39
SLF2-201ENST00000238961 HSP90AA2PQ14568 343 aaPredicted RBP12.6□□□□□ -0.39
SLF2-201ENST00000238961 HMGN5P82970 282 aaKnown RBP12.6□□□□□ -0.39
SLF2-201ENST00000238961 EVA1CP58658 441 aa12.6□□□□□ -0.39
SLF2-201ENST00000238961 CPLX2Q6PUV4 134 aaKnown RBP12.59□□□□□ -0.39
SLF2-201ENST00000238961 RWDD1Q9H446 243 aaPredicted RBP12.59□□□□□ -0.39
SLF2-201ENST00000238961 HOOK1Q9UJC3 728 aaKnown RBP12.59□□□□□ -0.39
SLF2-201ENST00000238961 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
SLF2-201ENST00000238961 MYO6Q9UM54 1294 aa12.58□□□□□ -0.4
SLF2-201ENST00000238961 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
SLF2-201ENST00000238961 SEPT7Q16181 437 aaKnown RBP12.58□□□□□ -0.4
SLF2-201ENST00000238961 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
SLF2-201ENST00000238961 TMF1P82094 1093 aa12.58□□□□□ -0.4
SLF2-201ENST00000238961 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
SLF2-201ENST00000238961 ST18O60284 1047 aa12.57□□□□□ -0.4
SLF2-201ENST00000238961 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
SLF2-201ENST00000238961 CHMP4CQ96CF2 233 aa12.57□□□□□ -0.4
SLF2-201ENST00000238961 CAGE1Q8TC20 777 aa12.56□□□□□ -0.4
SLF2-201ENST00000238961 ANKRD18AQ8IVF6 992 aa12.56□□□□□ -0.4
SLF2-201ENST00000238961 DHX37Q8IY37 1157 aaKnown RBP12.56□□□□□ -0.4
SLF2-201ENST00000238961 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
SLF2-201ENST00000238961 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLF2-201ENST00000238961 NEBLO76041 1014 aa12.55□□□□□ -0.4
SLF2-201ENST00000238961 WIZO95785 1651 aa12.55□□□□□ -0.4
SLF2-201ENST00000238961 IBSPP21815 317 aaPredicted RBP12.55□□□□□ -0.4
SLF2-201ENST00000238961 NFXL1Q6ZNB6 911 aa12.55□□□□□ -0.4
SLF2-201ENST00000238961 HSP90B2PQ58FF3 399 aa12.55□□□□□ -0.4
SLF2-201ENST00000238961 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
SLF2-201ENST00000238961 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLF2-201ENST00000238961 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
SLF2-201ENST00000238961 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
SLF2-201ENST00000238961 ERICH2A1L162 156 aa12.54□□□□□ -0.4
SLF2-201ENST00000238961 SYCP1Q15431 976 aa12.54□□□□□ -0.4
SLF2-201ENST00000238961 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
SLF2-201ENST00000238961 CPLX1O14810 134 aa12.53□□□□□ -0.4
SLF2-201ENST00000238961 LRRFIP1Q32MZ4 808 aaKnown RBP12.53□□□□□ -0.4
SLF2-201ENST00000238961 RBM33Q96EV2 1170 aaKnown RBP12.53□□□□□ -0.4
SLF2-201ENST00000238961 MTMR7Q9Y216 660 aa12.53□□□□□ -0.4
SLF2-201ENST00000238961 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
SLF2-201ENST00000238961 EZRP15311 586 aaKnown RBP12.52□□□□□ -0.4
SLF2-201ENST00000238961 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.4
SLF2-201ENST00000238961 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.4
SLF2-201ENST00000238961 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.4
SLF2-201ENST00000238961 FYB1O15117 783 aa12.52□□□□□ -0.41
SLF2-201ENST00000238961 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
SLF2-201ENST00000238961 BAZ1AQ9NRL2 1556 aaPredicted RBP12.51□□□□□ -0.41
SLF2-201ENST00000238961 KANK1Q14678 1352 aa12.51□□□□□ -0.41
SLF2-201ENST00000238961 MNS1Q8NEH6 495 aa12.51□□□□□ -0.41
SLF2-201ENST00000238961 AMPHP49418 695 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms