RNA–Protein interactions for RNA: ENSMUST00000110053.8

Use1-202, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Use1, Length 1,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-202ENSMUST00000110053 Naip5Q9R016 1403 aa17.61■□□□□ 0.41
Use1-202ENSMUST00000110053 Plch2A2AP18 1501 aa17.61■□□□□ 0.41
Use1-202ENSMUST00000110053 Cabp1Q9JLK7 227 aa17.6■□□□□ 0.41
Use1-202ENSMUST00000110053 Abca17E9PX95 1733 aa17.59■□□□□ 0.41
Use1-202ENSMUST00000110053 Arhgap23Q69ZH9 1483 aa17.59■□□□□ 0.41
Use1-202ENSMUST00000110053 Adgrb2Q8CGM1 1561 aa17.58■□□□□ 0.41
Use1-202ENSMUST00000110053 Bcl9Q9D219 1425 aa17.57■□□□□ 0.4
Use1-202ENSMUST00000110053 Zbtb7cQ8VCZ7 619 aa17.57■□□□□ 0.4
Use1-202ENSMUST00000110053 Usp54Q8BL06 1588 aaKnown RBP17.57■□□□□ 0.4
Use1-202ENSMUST00000110053 Spag9Q58A65 1321 aaKnown RBP17.56■□□□□ 0.4
Use1-202ENSMUST00000110053 Chic2Q9D9G3 165 aa17.56■□□□□ 0.4
Use1-202ENSMUST00000110053 Adgrl2Q8JZZ7 1487 aa17.56■□□□□ 0.4
Use1-202ENSMUST00000110053 Ssh2Q5SW75 1423 aa17.55■□□□□ 0.4
Use1-202ENSMUST00000110053 Pip4k2bQ80XI4 416 aa17.54■□□□□ 0.4
Use1-202ENSMUST00000110053 Med14A2ABV5 1459 aaKnown RBP17.54■□□□□ 0.4
Use1-202ENSMUST00000110053 Ltbp4Q8K4G1 1666 aa17.53■□□□□ 0.4
Use1-202ENSMUST00000110053 Fbxo41Q6NS60 873 aa17.52■□□□□ 0.4
Use1-202ENSMUST00000110053 Kdm3bQ6ZPY7 1562 aa17.52■□□□□ 0.39
Use1-202ENSMUST00000110053 Il16O54824 1322 aa17.51■□□□□ 0.39
Use1-202ENSMUST00000110053 Gm13697A2AK42 830 aa17.51■□□□□ 0.39
Use1-202ENSMUST00000110053 Ncoa1P70365 1447 aa17.48■□□□□ 0.39
Use1-202ENSMUST00000110053 Rsph4aQ8BYM7 716 aa17.48■□□□□ 0.39
Use1-202ENSMUST00000110053 Abcc6Q9R1S7 1498 aa17.48■□□□□ 0.39
Use1-202ENSMUST00000110053 ShprhQ7TPQ3 1674 aa17.48■□□□□ 0.39
Use1-202ENSMUST00000110053 Vps8Q0P5W1 1427 aa17.47■□□□□ 0.39
Use1-202ENSMUST00000110053 Prex1Q69ZK0 1650 aa17.47■□□□□ 0.39
Use1-202ENSMUST00000110053 Myo5cE9Q1F5 1742 aa17.45■□□□□ 0.38
Use1-202ENSMUST00000110053 Hfm1D3Z4R1 1434 aa17.45■□□□□ 0.38
Use1-202ENSMUST00000110053 Rimbp3Q3V0F0 1606 aa17.43■□□□□ 0.38
Use1-202ENSMUST00000110053 Phlpp1Q8CHE4 1687 aa17.43■□□□□ 0.38
Use1-202ENSMUST00000110053 Robo2Q7TPD3 1470 aa17.43■□□□□ 0.38
Use1-202ENSMUST00000110053 Hnrnpul2Q00PI9 745 aaKnown RBP17.42■□□□□ 0.38
Use1-202ENSMUST00000110053 GphnQ8BUV3 769 aaKnown RBP17.4■□□□□ 0.38
Use1-202ENSMUST00000110053 Adamts7Q68SA9 1657 aa17.39■□□□□ 0.37
Use1-202ENSMUST00000110053 Scaf11E9PZM7 1456 aaKnown RBP17.39■□□□□ 0.37
Use1-202ENSMUST00000110053 Pde4cQ3UEI1 686 aa17.39■□□□□ 0.37
Use1-202ENSMUST00000110053 Kif1bQ60575 1816 aaKnown RBP17.38■□□□□ 0.37
Use1-202ENSMUST00000110053 Fam50aQ9WV03 339 aaKnown RBP17.36■□□□□ 0.37
Use1-202ENSMUST00000110053 Rims2Q9EQZ7 1530 aa17.36■□□□□ 0.37
Use1-202ENSMUST00000110053 AlkP97793 1621 aa17.34■□□□□ 0.37
Use1-202ENSMUST00000110053 DroshaQ5HZJ0 1373 aaKnown RBP17.34■□□□□ 0.37
Use1-202ENSMUST00000110053 Akap12Q9WTQ5 1684 aa17.33■□□□□ 0.37
Use1-202ENSMUST00000110053 Adgrb3Q80ZF8 1522 aa17.33■□□□□ 0.37
Use1-202ENSMUST00000110053 UacaQ8CGB3 1411 aa17.33■□□□□ 0.36
Use1-202ENSMUST00000110053 Gli3Q61602 1583 aa17.32■□□□□ 0.36
Use1-202ENSMUST00000110053 Chd2E9PZM4 1827 aaKnown RBP17.32■□□□□ 0.36
Use1-202ENSMUST00000110053 Tmem131lQ3U3D7 1597 aa17.32■□□□□ 0.36
Use1-202ENSMUST00000110053 Asxl1P59598 1514 aa17.31■□□□□ 0.36
Use1-202ENSMUST00000110053 UbtfP25976 765 aaKnown RBP17.31■□□□□ 0.36
Use1-202ENSMUST00000110053 Ecm2Q5FW85 670 aa17.31■□□□□ 0.36
Use1-202ENSMUST00000110053 Rfx7F8VPJ6 1459 aa17.31■□□□□ 0.36
Use1-202ENSMUST00000110053 NclP09405 707 aaKnown RBP17.3■□□□□ 0.36
Use1-202ENSMUST00000110053 Zfp644E9QA22 1323 aa17.29■□□□□ 0.36
Use1-202ENSMUST00000110053 Fhad1A6PWD2 1420 aa17.28■□□□□ 0.36
Use1-202ENSMUST00000110053 Nup155Q99P88 1391 aaKnown RBP17.27■□□□□ 0.35
Use1-202ENSMUST00000110053 Ttc21bQ0HA38 1315 aa17.26■□□□□ 0.35
Use1-202ENSMUST00000110053 AnkarA2RT91 1465 aa17.26■□□□□ 0.35
Use1-202ENSMUST00000110053 Map4P27546 1125 aaKnown RBP17.26■□□□□ 0.35
Use1-202ENSMUST00000110053 Rapgef3Q8VCC8 918 aa17.26■□□□□ 0.35
Use1-202ENSMUST00000110053 Arid4bA2CG63 1314 aaKnown RBP17.25■□□□□ 0.35
Use1-202ENSMUST00000110053 Lamc1P02468 1607 aaKnown RBP17.24■□□□□ 0.35
Use1-202ENSMUST00000110053 Kif13aQ9EQW7 1749 aa17.24■□□□□ 0.35
Use1-202ENSMUST00000110053 Itsn1Q9Z0R4 1714 aa17.22■□□□□ 0.35
Use1-202ENSMUST00000110053 Ylpm1Q9R0I7 1386 aaKnown RBP17.22■□□□□ 0.35
Use1-202ENSMUST00000110053 Kdm5aQ3UXZ9 1690 aa17.22■□□□□ 0.35
Use1-202ENSMUST00000110053 Iqgap1Q9JKF1 1657 aaKnown RBP17.21■□□□□ 0.35
Use1-202ENSMUST00000110053 Ino80Q6ZPV2 1559 aa17.21■□□□□ 0.35
Use1-202ENSMUST00000110053 Skint5A7XUY5 1461 aa17.21■□□□□ 0.35
Use1-202ENSMUST00000110053 Hspa1lP16627 641 aa17.2■□□□□ 0.34
Use1-202ENSMUST00000110053 Myom3A2ABU4 1439 aa17.2■□□□□ 0.34
Use1-202ENSMUST00000110053 Clstn2Q9ER65 966 aa17.19■□□□□ 0.34
Use1-202ENSMUST00000110053 Nrxn3Q6P9K9 1571 aa17.19■□□□□ 0.34
Use1-202ENSMUST00000110053 PzpQ61838 1495 aa17.18■□□□□ 0.34
Use1-202ENSMUST00000110053 Tubgcp6G5E8P0 1769 aa17.17■□□□□ 0.34
Use1-202ENSMUST00000110053 Ttll5Q8CHB8 1328 aa17.17■□□□□ 0.34
Use1-202ENSMUST00000110053 Gemin5Q8BX17 1502 aaKnown RBP17.16■□□□□ 0.34
Use1-202ENSMUST00000110053 Naip7Q9JIB3 1402 aa17.16■□□□□ 0.34
Use1-202ENSMUST00000110053 Prdm2A2A7B5 1709 aaKnown RBP17.16■□□□□ 0.34
Use1-202ENSMUST00000110053 Nsd2Q8BVE8 1365 aa17.15■□□□□ 0.34
Use1-202ENSMUST00000110053 Cd109Q8R422 1442 aa17.15■□□□□ 0.34
Use1-202ENSMUST00000110053 Eif2ak4Q9QZ05 1648 aa17.15■□□□□ 0.34
Use1-202ENSMUST00000110053 Iqsec2Q5DU25 1478 aa17.15■□□□□ 0.34
Use1-202ENSMUST00000110053 Txndc2Q6P902 515 aa17.14■□□□□ 0.33
Use1-202ENSMUST00000110053 Zc3h13E9Q784 1729 aaKnown RBP17.13■□□□□ 0.33
Use1-202ENSMUST00000110053 Efcab6Q6P1E8 1516 aa17.13■□□□□ 0.33
Use1-202ENSMUST00000110053 Erich6D3Z6S9 713 aa17.13■□□□□ 0.33
Use1-202ENSMUST00000110053 Med1Q925J9 1575 aa17.12■□□□□ 0.33
Use1-202ENSMUST00000110053 Iqgap3F8VQ29 1632 aa17.12■□□□□ 0.33
Use1-202ENSMUST00000110053 Tecpr2Q3UH45 1423 aa17.12■□□□□ 0.33
Use1-202ENSMUST00000110053 Ube2uB1AUC4 352 aa17.11■□□□□ 0.33
Use1-202ENSMUST00000110053 Mia2Q91ZV0 1396 aa17.1■□□□□ 0.33
Use1-202ENSMUST00000110053 Bcl11bQ99PV8 884 aa17.09■□□□□ 0.33
Use1-202ENSMUST00000110053 PtprgQ05909 1442 aa17.09■□□□□ 0.33
Use1-202ENSMUST00000110053 Tarbp1E9Q368 1579 aa17.09■□□□□ 0.33
Use1-202ENSMUST00000110053 Myo3aQ8K3H5 1613 aa17.09■□□□□ 0.33
Use1-202ENSMUST00000110053 P3h3Q8CG70 732 aa17.08■□□□□ 0.32
Use1-202ENSMUST00000110053 IghaA0A0A6YXW6 389 aa17.07■□□□□ 0.32
Use1-202ENSMUST00000110053 Trak1Q6PD31 939 aa17.07■□□□□ 0.32
Use1-202ENSMUST00000110053 Stk24Q99KH8 431 aa17.07■□□□□ 0.32
Use1-202ENSMUST00000110053 Uggt1Q6P5E4 1551 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms