RNA–Protein interactions for RNA: ENSMUST00000110053.8

Use1-202, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Use1, Length 1,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-202ENSMUST00000110053 Gm35339A0A140LHH9 1649 aa26.41■■□□□ 1.82
Use1-202ENSMUST00000110053 NischQ80TM9 1593 aa25.99■■□□□ 1.75
Use1-202ENSMUST00000110053 Abcc8B2RUS7 1588 aa25.2■■□□□ 1.62
Use1-202ENSMUST00000110053 Abcc9P70170 1546 aa25.16■■□□□ 1.62
Use1-202ENSMUST00000110053 ScribQ80U72 1612 aa24.46■■□□□ 1.51
Use1-202ENSMUST00000110053 Kdm5dQ62240 1548 aa23.59■■□□□ 1.37
Use1-202ENSMUST00000110053 NacadQ5SWP3 1504 aa23.58■■□□□ 1.36
Use1-202ENSMUST00000110053 Sycp2Q9CUU3 1500 aa23.15■■□□□ 1.3
Use1-202ENSMUST00000110053 Dcaf1Q80TR8 1506 aa23.11■■□□□ 1.29
Use1-202ENSMUST00000110053 BicraF8VPZ9 1578 aa22.89■■□□□ 1.26
Use1-202ENSMUST00000110053 Rb1cc1Q9ESK9 1588 aa22.66■■□□□ 1.22
Use1-202ENSMUST00000110053 Dnajc5bQ9CQ94 199 aa22.57■■□□□ 1.2
Use1-202ENSMUST00000110053 Baz1aO88379 1555 aa22.3■■□□□ 1.16
Use1-202ENSMUST00000110053 Rhox8Q6VSS7 320 aa22.28■■□□□ 1.16
Use1-202ENSMUST00000110053 Pds5bQ4VA53 1446 aaKnown RBP22.21■■□□□ 1.15
Use1-202ENSMUST00000110053 Ccdc180J3QNE4 1664 aa22.18■■□□□ 1.14
Use1-202ENSMUST00000110053 Thoc2B1AZI6 1594 aaKnown RBP22.16■■□□□ 1.14
Use1-202ENSMUST00000110053 Crybg2B7ZCC2 1516 aa22.16■■□□□ 1.14
Use1-202ENSMUST00000110053 Zcchc6Q5BLK4 1491 aaKnown RBP22.04■■□□□ 1.12
Use1-202ENSMUST00000110053 Atad2bE9Q166 1460 aaKnown RBP21.98■■□□□ 1.11
Use1-202ENSMUST00000110053 Cc2d2aQ8CFW7 1633 aa21.79■■□□□ 1.08
Use1-202ENSMUST00000110053 Ercc6F8VPZ5 1481 aa21.77■■□□□ 1.07
Use1-202ENSMUST00000110053 Smarca4Q3TKT4 1613 aaKnown RBP21.76■■□□□ 1.07
Use1-202ENSMUST00000110053 Smarca2Q6DIC0 1577 aa21.74■■□□□ 1.07
Use1-202ENSMUST00000110053 Cecr2E9Q2Z1 1453 aa21.7■■□□□ 1.06
Use1-202ENSMUST00000110053 Iqgap2Q3UQ44 1575 aa21.68■■□□□ 1.06
Use1-202ENSMUST00000110053 Fam135aQ6NS59 1506 aa21.61■■□□□ 1.05
Use1-202ENSMUST00000110053 Wdr62Q3U3T8 1523 aa21.52■■□□□ 1.04
Use1-202ENSMUST00000110053 Frmpd1A2AKB4 1549 aa21.5■■□□□ 1.03
Use1-202ENSMUST00000110053 Phldb1Q6PDH0 1371 aaKnown RBP21.36■■□□□ 1.01
Use1-202ENSMUST00000110053 Baz1bQ9Z277 1479 aa21.22■□□□□ 0.99
Use1-202ENSMUST00000110053 Unc13aQ4KUS2 1712 aa21.21■□□□□ 0.99
Use1-202ENSMUST00000110053 Ubl4bQ9CQ84 188 aa21.17■□□□□ 0.98
Use1-202ENSMUST00000110053 CftrP26361 1476 aa21.13■□□□□ 0.97
Use1-202ENSMUST00000110053 Synj1Q8CHC4 1574 aa21.1■□□□□ 0.97
Use1-202ENSMUST00000110053 Cttnbp2B9EJA2 1648 aa21.09■□□□□ 0.97
Use1-202ENSMUST00000110053 Mrc2Q64449 1479 aa21.08■□□□□ 0.97
Use1-202ENSMUST00000110053 Rtl1Q7M732 1744 aa21.07■□□□□ 0.96
Use1-202ENSMUST00000110053 Brd4Q9ESU6 1400 aaKnown RBP20.97■□□□□ 0.95
Use1-202ENSMUST00000110053 Ccdc136Q3TVA9 1136 aa20.9■□□□□ 0.94
Use1-202ENSMUST00000110053 Esf1Q3V1V3 845 aaKnown RBP20.69■□□□□ 0.9
Use1-202ENSMUST00000110053 Cux2P70298 1426 aa20.69■□□□□ 0.9
Use1-202ENSMUST00000110053 Lrriq1Q0P5X1 1673 aa20.67■□□□□ 0.9
Use1-202ENSMUST00000110053 Kif15Q6P9L6 1387 aa20.66■□□□□ 0.9
Use1-202ENSMUST00000110053 Rsf1E9PWW9 1441 aaKnown RBP20.65■□□□□ 0.9
Use1-202ENSMUST00000110053 Trim41Q5NCC3 630 aa20.61■□□□□ 0.89
Use1-202ENSMUST00000110053 Kif21aQ9QXL2 1672 aa20.6■□□□□ 0.89
Use1-202ENSMUST00000110053 Lamc3Q9R0B6 1581 aa20.54■□□□□ 0.88
Use1-202ENSMUST00000110053 Dnajc5P60904 198 aa20.5■□□□□ 0.87
Use1-202ENSMUST00000110053 Npm1Q61937 292 aaKnown RBP20.39■□□□□ 0.85
Use1-202ENSMUST00000110053 Eif4g3Q80XI3 1579 aaKnown RBP20.36■□□□□ 0.85
Use1-202ENSMUST00000110053 Cep164Q5DU05 1446 aa20.34■□□□□ 0.85
Use1-202ENSMUST00000110053 TnnQ80Z71 1560 aa20.28■□□□□ 0.84
Use1-202ENSMUST00000110053 Urb2E9Q7L1 1524 aaKnown RBP20.27■□□□□ 0.83
Use1-202ENSMUST00000110053 Dhx29Q6PGC1 1365 aaKnown RBP20.24■□□□□ 0.83
Use1-202ENSMUST00000110053 Top2bQ64511 1612 aa20.23■□□□□ 0.83
Use1-202ENSMUST00000110053 Plb1Q3TTY0 1478 aa20.23■□□□□ 0.83
Use1-202ENSMUST00000110053 Il27Q8K3I6 234 aa20.22■□□□□ 0.83
Use1-202ENSMUST00000110053 Golga3P55937 1487 aa20.21■□□□□ 0.83
Use1-202ENSMUST00000110053 Ccdc18Q640L5 1455 aa20.19■□□□□ 0.82
Use1-202ENSMUST00000110053 Shroom2A2ALU4 1481 aa20.18■□□□□ 0.82
Use1-202ENSMUST00000110053 Camsap1A2AHC3 1581 aa20.17■□□□□ 0.82
Use1-202ENSMUST00000110053 LrpprcQ6PB66 1392 aaKnown RBP20.15■□□□□ 0.82
Use1-202ENSMUST00000110053 Cngb1E1AZ71 1325 aa20.14■□□□□ 0.81
Use1-202ENSMUST00000110053 Crocc2F6XLV1 1638 aa20.13■□□□□ 0.81
Use1-202ENSMUST00000110053 PogzQ8BZH4 1409 aaKnown RBP20.03■□□□□ 0.8
Use1-202ENSMUST00000110053 Fmn1Q05860 1466 aa20■□□□□ 0.79
Use1-202ENSMUST00000110053 Rusc2Q80U22 1514 aa19.99■□□□□ 0.79
Use1-202ENSMUST00000110053 Ift140E9PY46 1464 aa19.99■□□□□ 0.79
Use1-202ENSMUST00000110053 Col17a1Q07563 1470 aa19.95■□□□□ 0.78
Use1-202ENSMUST00000110053 Duox2A2AQ99 1517 aa19.93■□□□□ 0.78
Use1-202ENSMUST00000110053 Pabpn1Q8CCS6 302 aaKnown RBP19.91■□□□□ 0.78
Use1-202ENSMUST00000110053 Grin2bQ01097 1482 aa19.87■□□□□ 0.77
Use1-202ENSMUST00000110053 Disp1Q3TDN0 1521 aa19.86■□□□□ 0.77
Use1-202ENSMUST00000110053 Samd9lQ69Z37 1561 aa19.83■□□□□ 0.76
Use1-202ENSMUST00000110053 Pelp1Q9DBD5 1123 aaKnown RBP19.82■□□□□ 0.76
Use1-202ENSMUST00000110053 Nup160Q9Z0W3 1402 aaKnown RBP19.76■□□□□ 0.75
Use1-202ENSMUST00000110053 Setd1bQ8CFT2 1985 aa19.74■□□□□ 0.75
Use1-202ENSMUST00000110053 Pbrm1Q8BSQ9 1634 aaKnown RBP19.72■□□□□ 0.75
Use1-202ENSMUST00000110053 Cc2d2bA0A286YDU8 1405 aa19.7■□□□□ 0.74
Use1-202ENSMUST00000110053 Rad54l2Q99NG0 1466 aa19.7■□□□□ 0.74
Use1-202ENSMUST00000110053 Efcab5A0JP43 1406 aa19.69■□□□□ 0.74
Use1-202ENSMUST00000110053 Ccdc88bQ4QRL3 1481 aa19.68■□□□□ 0.74
Use1-202ENSMUST00000110053 Zcchc11B2RX14 1644 aaKnown RBP19.67■□□□□ 0.74
Use1-202ENSMUST00000110053 Magi3Q9EQJ9 1476 aa19.63■□□□□ 0.73
Use1-202ENSMUST00000110053 Grin2aP35436 1464 aa19.62■□□□□ 0.73
Use1-202ENSMUST00000110053 Top2aQ01320 1528 aaKnown RBP19.61■□□□□ 0.73
Use1-202ENSMUST00000110053 AqrQ8CFQ3 1481 aaKnown RBP19.6■□□□□ 0.73
Use1-202ENSMUST00000110053 NrkQ9R0G8 1455 aa19.57■□□□□ 0.72
Use1-202ENSMUST00000110053 PtprkP35822 1457 aa19.54■□□□□ 0.72
Use1-202ENSMUST00000110053 Fgd6Q69ZL1 1399 aa19.53■□□□□ 0.72
Use1-202ENSMUST00000110053 Pla2r1Q62028 1487 aa19.51■□□□□ 0.71
Use1-202ENSMUST00000110053 Adgrl3Q80TS3 1537 aa19.51■□□□□ 0.71
Use1-202ENSMUST00000110053 Shroom4Q1W617 1475 aa19.5■□□□□ 0.71
Use1-202ENSMUST00000110053 Chic1Q8CBW7 227 aa19.5■□□□□ 0.71
Use1-202ENSMUST00000110053 Cep170Q6A065 1588 aa19.49■□□□□ 0.71
Use1-202ENSMUST00000110053 Gpatch8A2A6A1 1505 aa19.47■□□□□ 0.71
Use1-202ENSMUST00000110053 SynmQ70IV5 1561 aa19.46■□□□□ 0.71
Use1-202ENSMUST00000110053 Gapvd1Q6PAR5 1458 aa19.46■□□□□ 0.71
Use1-202ENSMUST00000110053 AknaQ80VW7 1404 aa19.42■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms