RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Cdc42bpgQ80UW5 1551 aa27.92■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 ShprhQ7TPQ3 1674 aa27.91■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Hspa5P20029 655 aaKnown RBP27.9■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Robo2Q7TPD3 1470 aa27.9■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Las1lA2BE28 776 aaKnown RBP27.89■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Trak1Q6PD31 939 aa27.89■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Plch2A2AP18 1501 aa27.89■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Zbtb7cQ8VCZ7 619 aa27.87■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Topbp1Q6ZQF0 1515 aa27.87■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Pde4cQ3UEI1 686 aa27.86■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Kif1bQ60575 1816 aaKnown RBP27.86■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Kif3bQ61771 747 aa27.85■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Gli2Q0VGT2 1544 aa27.83■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Yeats2Q3TUF7 1407 aa27.83■■■□□ 2.05
Ttc39a-203ENSMUST00000106619 Rprd2Q6NXI6 1469 aaKnown RBP27.82■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Pik3c2gO70167 1506 aa27.82■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Cul9Q80TT8 1865 aa27.81■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Cd109Q8R422 1442 aa27.81■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Myo5cE9Q1F5 1742 aa27.8■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Dhx9O70133 1380 aaKnown RBP27.8■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Naip6Q9JIB6 1403 aa27.8■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Uggt2E9Q4X2 1504 aa27.79■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Kif14L0N7N1 1674 aaKnown RBP27.79■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Trpm1Q2TV84 1622 aa27.77■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 DroshaQ5HZJ0 1373 aaKnown RBP27.77■■■□□ 2.04
Ttc39a-203ENSMUST00000106619 Hnrnpul2Q00PI9 745 aaKnown RBP27.76■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Usp47Q8BY87 1376 aa27.76■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Naip5Q9R016 1403 aa27.75■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Nsd2Q8BVE8 1365 aa27.74■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Myom3A2ABU4 1439 aa27.74■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Zmym4A2A791 1549 aaKnown RBP27.72■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Atp7aQ64430 1491 aa27.71■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Ylpm1Q9R0I7 1386 aaKnown RBP27.7■■■□□ 2.03
Ttc39a-203ENSMUST00000106619 Abca6Q8K441 1624 aa27.68■■■□□ 2.02
Ttc39a-203ENSMUST00000106619 Tmem131lQ3U3D7 1597 aa27.67■■■□□ 2.02
Ttc39a-203ENSMUST00000106619 Dot1lQ6XZL8 1540 aa27.64■■■□□ 2.02
Ttc39a-203ENSMUST00000106619 Prex1Q69ZK0 1650 aa27.64■■■□□ 2.02
Ttc39a-203ENSMUST00000106619 AnkarA2RT91 1465 aa27.63■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 NpatQ8BMA5 1420 aa27.63■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Pcdh10E9PXQ7 1057 aa27.6■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Qser1A2BIE1 1698 aa27.6■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Ppip5k1A2ARP1 1436 aa27.59■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Rock1P70335 1354 aa27.59■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Camsap2Q8C1B1 1461 aa27.59■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Cfap65Q3V0B4 1847 aa27.59■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Ttc21bQ0HA38 1315 aa27.58■■■□□ 2.01
Ttc39a-203ENSMUST00000106619 Tarbp1E9Q368 1579 aa27.57■■■□□ 2
Ttc39a-203ENSMUST00000106619 Edc4Q3UJB9 1406 aaKnown RBP27.57■■■□□ 2
Ttc39a-203ENSMUST00000106619 Hdac5Q9Z2V6 1113 aa27.56■■■□□ 2
Ttc39a-203ENSMUST00000106619 Dnajc5gQ8C632 165 aa27.51■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Adamts7Q68SA9 1657 aa27.49■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Rgl3Q3UYI5 709 aa27.48■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Iqgap3F8VQ29 1632 aa27.48■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Rsph4aQ8BYM7 716 aa27.48■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Akap12Q9WTQ5 1684 aa27.46■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Talpid3E9PV87 1520 aa27.45■■□□□ 1.99
Ttc39a-203ENSMUST00000106619 Washc2Q6PGL7 1334 aa27.44■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Aebp2Q9Z248 504 aaKnown RBP27.43■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Mbd5B1AYB6 1498 aa27.41■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Tecpr2Q3UH45 1423 aa27.41■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Adamtsl3G3UXC7 1706 aa27.41■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Ppargc1bQ8VHJ7 1014 aa27.4■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Afap1Q80YS6 731 aa27.4■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Erich6D3Z6S9 713 aa27.39■■□□□ 1.98
Ttc39a-203ENSMUST00000106619 Ino80Q6ZPV2 1559 aa27.39■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Neurod1Q60867 357 aa27.37■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Myom2Q14BI5 1463 aa27.36■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Abca8aQ8K442 1620 aa27.36■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 ErbinQ80TH2 1402 aa27.36■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Iqgap1Q9JKF1 1657 aaKnown RBP27.36■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 CltcQ68FD5 1675 aaKnown RBP27.34■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Knl1Q66JQ7 1612 aa27.33■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Hfm1D3Z4R1 1434 aa27.33■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Cpsf1Q9EPU4 1441 aaKnown RBP27.33■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Arhgap23Q69ZH9 1483 aa27.33■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Abcc6Q9R1S7 1498 aa27.33■■□□□ 1.97
Ttc39a-203ENSMUST00000106619 Wdr66E9Q743 1299 aa27.32■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Efcab6Q6P1E8 1516 aa27.32■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Adgrb3Q80ZF8 1522 aa27.32■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Prdm2A2A7B5 1709 aaKnown RBP27.31■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 RictorQ6QI06 1708 aa27.31■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Polr3aB2RXC6 1390 aa27.31■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Adamts13Q769J6 1426 aa27.31■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Mug2P28666 1451 aa27.31■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Plppr3Q7TPB0 716 aa27.3■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Mroh3A0A1D5RM54 893 aa27.3■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Sall3Q62255 1320 aa27.28■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Gm13697A2AK42 830 aa27.27■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Uggt1Q6P5E4 1551 aa27.27■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Tulp4Q9JIL5 1547 aa27.27■■□□□ 1.96
Ttc39a-203ENSMUST00000106619 Ehbp1l1Q99MS7 1716 aa27.26■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Stk24Q99KH8 431 aa27.25■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Grwd1Q810D6 446 aaKnown RBP27.25■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 AatkQ80YE4 1365 aa27.24■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Skint5A7XUY5 1461 aa27.23■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Cdk13Q69ZA1 1511 aaKnown RBP27.22■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Dapk1Q80YE7 1442 aa27.22■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 ClspnQ80YR7 1315 aa27.21■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Ahdc1Q6PAL7 1594 aaKnown RBP27.2■■□□□ 1.95
Ttc39a-203ENSMUST00000106619 Ifit1bl1D3Z6F0 470 aa27.18■■□□□ 1.94
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms