RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Usp54Q8BL06 1588 aaKnown RBP22.35■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 Depdc5P61460 1591 aa22.34■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 Robo2Q7TPD3 1470 aa22.33■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 ShprhQ7TPQ3 1674 aa22.31■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Zbtb7cQ8VCZ7 619 aa22.31■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Atp10aO54827 1508 aa22.31■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Kiaa0556Q8C753 1610 aa22.3■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Ttc37F8VPK0 1563 aa22.3■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Ppargc1bQ8VHJ7 1014 aa22.3■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Cd109Q8R422 1442 aa22.3■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Pde4cQ3UEI1 686 aa22.29■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Znf518aB2RRF6 1478 aaKnown RBP22.29■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Kif1bQ60575 1816 aaKnown RBP22.28■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Kif14L0N7N1 1674 aaKnown RBP22.28■■□□□ 1.16
Pdlim1-201ENSMUST00000068439 Ppp1r18Q8BQ30 594 aa22.26■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Dot1lQ6XZL8 1540 aa22.24■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Atp7aQ64430 1491 aa22.23■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Ptch1Q61115 1434 aa22.22■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Myo5cE9Q1F5 1742 aa22.21■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Kif3bQ61771 747 aa22.21■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Myom3A2ABU4 1439 aa22.21■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Gm13697A2AK42 830 aa22.21■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Plch2A2AP18 1501 aa22.21■■□□□ 1.15
Pdlim1-201ENSMUST00000068439 Hnrnpul2Q00PI9 745 aaKnown RBP22.2■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Topbp1Q6ZQF0 1515 aa22.2■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Nsd2Q8BVE8 1365 aa22.19■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Cdc42bpgQ80UW5 1551 aa22.19■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Rock1P70335 1354 aa22.19■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Dip2cE9PWR4 1557 aa22.19■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 RereQ80TZ9 1558 aa22.19■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Ttbk1Q6PCN3 1308 aa22.18■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Rgl3Q3UYI5 709 aa22.16■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Ppip5k1A2ARP1 1436 aa22.16■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Fndc1E9Q043 1732 aa22.15■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Mbd5B1AYB6 1498 aa22.15■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Ylpm1Q9R0I7 1386 aaKnown RBP22.15■■□□□ 1.14
Pdlim1-201ENSMUST00000068439 Gli2Q0VGT2 1544 aa22.14■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Tarbp1E9Q368 1579 aa22.13■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Neurod1Q60867 357 aa22.13■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Synj2Q9D2G5 1434 aa22.13■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Naip6Q9JIB6 1403 aa22.12■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Uggt2E9Q4X2 1504 aa22.11■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Tmem131lQ3U3D7 1597 aa22.11■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Edc4Q3UJB9 1406 aaKnown RBP22.1■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Abca6Q8K441 1624 aa22.1■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Hecw2Q6I6G8 1578 aa22.1■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Hdac5Q9Z2V6 1113 aa22.09■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 AdgbG3UZ78 1657 aa22.09■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 AnkarA2RT91 1465 aa22.08■■□□□ 1.13
Pdlim1-201ENSMUST00000068439 Cul9Q80TT8 1865 aa22.07■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Yeats2Q3TUF7 1407 aa22.07■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Washc2Q6PGL7 1334 aa22.06■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Mug2P28666 1451 aa22.06■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Trpm1Q2TV84 1622 aa22.06■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Prex1Q69ZK0 1650 aa22.05■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Iqgap1Q9JKF1 1657 aaKnown RBP22.05■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Ttc21bQ0HA38 1315 aa22.04■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Cpsf1Q9EPU4 1441 aaKnown RBP22.04■■□□□ 1.12
Pdlim1-201ENSMUST00000068439 Polr3aB2RXC6 1390 aa22.02■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Dapk1Q80YE7 1442 aa22.01■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Sin3aQ60520 1274 aaKnown RBP21.99■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Iqgap3F8VQ29 1632 aa21.98■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Cdk13Q69ZA1 1511 aaKnown RBP21.97■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Grwd1Q810D6 446 aaKnown RBP21.96■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Adamts13Q769J6 1426 aa21.96■■□□□ 1.11
Pdlim1-201ENSMUST00000068439 Erich6D3Z6S9 713 aa21.94■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Zmym4A2A791 1549 aaKnown RBP21.93■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 RalgapbQ8BQZ4 1484 aa21.93■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Ncoa1P70365 1447 aa21.92■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Rundc1Q0VDN7 615 aa21.92■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Abcc6Q9R1S7 1498 aa21.92■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Akap12Q9WTQ5 1684 aa21.91■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Mroh3A0A1D5RM54 893 aa21.91■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Abca8aQ8K442 1620 aa21.9■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Tulp4Q9JIL5 1547 aa21.9■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Cfap65Q3V0B4 1847 aa21.9■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 ErbinQ80TH2 1402 aa21.89■■□□□ 1.1
Pdlim1-201ENSMUST00000068439 Tecpr2Q3UH45 1423 aa21.89■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Adamts7Q68SA9 1657 aa21.88■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Talpid3E9PV87 1520 aa21.88■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Card11Q8CIS0 1159 aa21.88■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Cwc22Q8C5N3 908 aaKnown RBP21.87■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Sall3Q62255 1320 aa21.86■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Ino80Q6ZPV2 1559 aa21.86■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 NpatQ8BMA5 1420 aa21.86■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Ifit1bl1D3Z6F0 470 aa21.86■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Adgrb3Q80ZF8 1522 aa21.85■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Efcab6Q6P1E8 1516 aa21.84■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Prdm2A2A7B5 1709 aaKnown RBP21.83■■□□□ 1.09
Pdlim1-201ENSMUST00000068439 Qser1A2BIE1 1698 aa21.82■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 Mapk8ip2Q9ERE9 830 aa21.82■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 Ehbp1l1Q99MS7 1716 aa21.82■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 Stk24Q99KH8 431 aa21.81■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 AatkQ80YE4 1365 aa21.8■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 Rsph4aQ8BYM7 716 aa21.8■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 Knl1Q66JQ7 1612 aa21.79■■□□□ 1.08
Pdlim1-201ENSMUST00000068439 Myom2Q14BI5 1463 aa21.76■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Uggt1Q6P5E4 1551 aa21.75■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Rims1Q99NE5 1463 aa21.75■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Rock2P70336 1388 aa21.75■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms