RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Asxl1P59598 1514 aa19.06■□□□□ 0.64
Lime1-201ENSMUST00000048077 Exoc6Q8R313 802 aa19.06■□□□□ 0.64
Lime1-201ENSMUST00000048077 Card11Q8CIS0 1159 aa19.05■□□□□ 0.64
Lime1-201ENSMUST00000048077 Ssh2Q5SW75 1423 aa19.03■□□□□ 0.64
Lime1-201ENSMUST00000048077 Arhgap5P97393 1501 aa19.03■□□□□ 0.64
Lime1-201ENSMUST00000048077 Cdk13Q69ZA1 1511 aaKnown RBP19.03■□□□□ 0.64
Lime1-201ENSMUST00000048077 Wwc2Q6NXJ0 1187 aa19.02■□□□□ 0.64
Lime1-201ENSMUST00000048077 Slc24a1Q91WD8 1130 aa19.02■□□□□ 0.64
Lime1-201ENSMUST00000048077 Setd1aE9PYH6 1716 aa19.01■□□□□ 0.63
Lime1-201ENSMUST00000048077 Gapvd1Q6PAR5 1458 aa19.01■□□□□ 0.63
Lime1-201ENSMUST00000048077 Ppip5k1A2ARP1 1436 aa19■□□□□ 0.63
Lime1-201ENSMUST00000048077 AknaQ80VW7 1404 aa19■□□□□ 0.63
Lime1-201ENSMUST00000048077 Gm14025A2AP89 1413 aa19■□□□□ 0.63
Lime1-201ENSMUST00000048077 NhsB1AV60 1647 aa18.99■□□□□ 0.63
Lime1-201ENSMUST00000048077 Fam71e1A1L3C1 212 aa18.97■□□□□ 0.63
Lime1-201ENSMUST00000048077 Abcc3B2RX12 1523 aa18.97■□□□□ 0.63
Lime1-201ENSMUST00000048077 Trappc8E9PWG2 1437 aa18.95■□□□□ 0.62
Lime1-201ENSMUST00000048077 Cd109Q8R422 1442 aa18.94■□□□□ 0.62
Lime1-201ENSMUST00000048077 Prdm16A2A935 1275 aa18.92■□□□□ 0.62
Lime1-201ENSMUST00000048077 Fkbp15Q6P9Q6 1216 aaKnown RBP18.92■□□□□ 0.62
Lime1-201ENSMUST00000048077 Rrp7aQ9D1C9 280 aaKnown RBP18.92■□□□□ 0.62
Lime1-201ENSMUST00000048077 Atp7aQ64430 1491 aa18.92■□□□□ 0.62
Lime1-201ENSMUST00000048077 Robo2Q7TPD3 1470 aa18.91■□□□□ 0.62
Lime1-201ENSMUST00000048077 Tubgcp6G5E8P0 1769 aa18.91■□□□□ 0.62
Lime1-201ENSMUST00000048077 Grwd1Q810D6 446 aaKnown RBP18.91■□□□□ 0.62
Lime1-201ENSMUST00000048077 Sart1Q9Z315 806 aaKnown RBP18.91■□□□□ 0.62
Lime1-201ENSMUST00000048077 Abca8bQ8K440 1620 aa18.91■□□□□ 0.62
Lime1-201ENSMUST00000048077 Hdac5Q9Z2V6 1113 aa18.9■□□□□ 0.62
Lime1-201ENSMUST00000048077 Cdc42bpbQ7TT50 1713 aa18.89■□□□□ 0.61
Lime1-201ENSMUST00000048077 Kdm5cP41230 1554 aa18.88■□□□□ 0.61
Lime1-201ENSMUST00000048077 Zmym4A2A791 1549 aaKnown RBP18.88■□□□□ 0.61
Lime1-201ENSMUST00000048077 Chd1P40201 1711 aa18.88■□□□□ 0.61
Lime1-201ENSMUST00000048077 Tarbp1E9Q368 1579 aa18.87■□□□□ 0.61
Lime1-201ENSMUST00000048077 AI481877A2ALV5 1481 aa18.87■□□□□ 0.61
Lime1-201ENSMUST00000048077 Cep170Q6A065 1588 aa18.86■□□□□ 0.61
Lime1-201ENSMUST00000048077 Abcc1O35379 1528 aa18.85■□□□□ 0.61
Lime1-201ENSMUST00000048077 Nolc1E9Q5C9 702 aaKnown RBP18.84■□□□□ 0.61
Lime1-201ENSMUST00000048077 Abca17E9PX95 1733 aa18.83■□□□□ 0.61
Lime1-201ENSMUST00000048077 Eif5bQ05D44 1216 aaKnown RBP18.83■□□□□ 0.61
Lime1-201ENSMUST00000048077 Wdr43Q6ZQL4 677 aaKnown RBP18.83■□□□□ 0.61
Lime1-201ENSMUST00000048077 Spag9Q58A65 1321 aaKnown RBP18.82■□□□□ 0.6
Lime1-201ENSMUST00000048077 Rtl5Q5DTT4 599 aa18.81■□□□□ 0.6
Lime1-201ENSMUST00000048077 Kif1bQ60575 1816 aaKnown RBP18.81■□□□□ 0.6
Lime1-201ENSMUST00000048077 Adamts13Q769J6 1426 aa18.81■□□□□ 0.6
Lime1-201ENSMUST00000048077 Ofd1Q80Z25 1017 aa18.81■□□□□ 0.6
Lime1-201ENSMUST00000048077 Atp10dQ8K2X1 1416 aa18.8■□□□□ 0.6
Lime1-201ENSMUST00000048077 Anp32bQ9EST5 272 aaKnown RBP18.8■□□□□ 0.6
Lime1-201ENSMUST00000048077 Nsd2Q8BVE8 1365 aa18.8■□□□□ 0.6
Lime1-201ENSMUST00000048077 Arid4bA2CG63 1314 aaKnown RBP18.79■□□□□ 0.6
Lime1-201ENSMUST00000048077 Kidins220E9Q9B7 1793 aa18.78■□□□□ 0.6
Lime1-201ENSMUST00000048077 Edc4Q3UJB9 1406 aaKnown RBP18.78■□□□□ 0.6
Lime1-201ENSMUST00000048077 ShprhQ7TPQ3 1674 aa18.78■□□□□ 0.6
Lime1-201ENSMUST00000048077 Igf1rQ60751 1373 aa18.76■□□□□ 0.59
Lime1-201ENSMUST00000048077 Pde4cQ3UEI1 686 aa18.76■□□□□ 0.59
Lime1-201ENSMUST00000048077 Usp54Q8BL06 1588 aaKnown RBP18.76■□□□□ 0.59
Lime1-201ENSMUST00000048077 Ppp4r2Q0VGB7 417 aa18.73■□□□□ 0.59
Lime1-201ENSMUST00000048077 Sbno1Q689Z5 1390 aa18.73■□□□□ 0.59
Lime1-201ENSMUST00000048077 Supt16hQ920B9 1047 aa18.73■□□□□ 0.59
Lime1-201ENSMUST00000048077 AnkarA2RT91 1465 aa18.72■□□□□ 0.59
Lime1-201ENSMUST00000048077 Tulp4Q9JIL5 1547 aa18.72■□□□□ 0.59
Lime1-201ENSMUST00000048077 Zscan21Q07231 555 aa18.71■□□□□ 0.59
Lime1-201ENSMUST00000048077 Kank1E9Q238 1360 aa18.71■□□□□ 0.59
Lime1-201ENSMUST00000048077 Ifit1bl1D3Z6F0 470 aa18.7■□□□□ 0.58
Lime1-201ENSMUST00000048077 Xrn1P97789 1719 aaKnown RBP18.7■□□□□ 0.58
Lime1-201ENSMUST00000048077 Uggt2E9Q4X2 1504 aa18.7■□□□□ 0.58
Lime1-201ENSMUST00000048077 Plch2A2AP18 1501 aa18.69■□□□□ 0.58
Lime1-201ENSMUST00000048077 P3h3Q8CG70 732 aa18.69■□□□□ 0.58
Lime1-201ENSMUST00000048077 Mink1Q9JM52 1308 aa18.69■□□□□ 0.58
Lime1-201ENSMUST00000048077 Ylpm1Q9R0I7 1386 aaKnown RBP18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Upf2A2AT37 1269 aaKnown RBP18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Rpgrip1lQ8CG73 1264 aa18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Zbtb7cQ8VCZ7 619 aa18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Pola1P33609 1465 aa18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 L3mbtl2P59178 703 aa18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Pelp1Q9DBD5 1123 aaKnown RBP18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Myo5cE9Q1F5 1742 aa18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 Zfyve16Q80U44 1528 aa18.68■□□□□ 0.58
Lime1-201ENSMUST00000048077 PrxO55103 1391 aa18.67■□□□□ 0.58
Lime1-201ENSMUST00000048077 Map3k5O35099 1380 aa18.66■□□□□ 0.58
Lime1-201ENSMUST00000048077 Mroh3A0A1D5RM54 893 aa18.66■□□□□ 0.58
Lime1-201ENSMUST00000048077 Mak16Q8BGS0 296 aaKnown RBP18.66■□□□□ 0.58
Lime1-201ENSMUST00000048077 Tex14Q7M6U3 1450 aa18.65■□□□□ 0.58
Lime1-201ENSMUST00000048077 Abcc6Q9R1S7 1498 aa18.65■□□□□ 0.58
Lime1-201ENSMUST00000048077 Ttbk1Q6PCN3 1308 aa18.65■□□□□ 0.58
Lime1-201ENSMUST00000048077 Nos1Q9Z0J4 1429 aa18.63■□□□□ 0.57
Lime1-201ENSMUST00000048077 Pank3Q8R2W9 370 aa18.62■□□□□ 0.57
Lime1-201ENSMUST00000048077 Tmf1B9EKI3 1091 aa18.62■□□□□ 0.57
Lime1-201ENSMUST00000048077 Cep152A2AUM9 1736 aaKnown RBP18.61■□□□□ 0.57
Lime1-201ENSMUST00000048077 Itsn2Q9Z0R6 1659 aa18.6■□□□□ 0.57
Lime1-201ENSMUST00000048077 Tmem131lQ3U3D7 1597 aa18.6■□□□□ 0.57
Lime1-201ENSMUST00000048077 Znf608Q56A10 1511 aa18.6■□□□□ 0.57
Lime1-201ENSMUST00000048077 Zscan10Q3URR7 782 aa18.6■□□□□ 0.57
Lime1-201ENSMUST00000048077 Fndc1E9Q043 1732 aa18.59■□□□□ 0.57
Lime1-201ENSMUST00000048077 Abca9Q8K449 1623 aa18.58■□□□□ 0.57
Lime1-201ENSMUST00000048077 Gm16486A0A1D5RMD1 1434 aa18.58■□□□□ 0.57
Lime1-201ENSMUST00000048077 Zfp444Q3TDV8 331 aaKnown RBP18.57■□□□□ 0.56
Lime1-201ENSMUST00000048077 Srcin1Q9QWI6 1250 aa18.57■□□□□ 0.56
Lime1-201ENSMUST00000048077 Znf518aB2RRF6 1478 aaKnown RBP18.57■□□□□ 0.56
Lime1-201ENSMUST00000048077 Clasp1Q80TV8 1535 aaKnown RBP18.57■□□□□ 0.56
Lime1-201ENSMUST00000048077 Inpp5dQ9ES52 1191 aa18.57■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms