RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Clstn2Q9ER65 966 aa20.35■□□□□ 0.85
Tpm3-201ENSMUST00000029549 Ssh2Q5SW75 1423 aa20.34■□□□□ 0.85
Tpm3-201ENSMUST00000029549 Abcc3B2RX12 1523 aa20.34■□□□□ 0.85
Tpm3-201ENSMUST00000029549 Kif14L0N7N1 1674 aaKnown RBP20.34■□□□□ 0.85
Tpm3-201ENSMUST00000029549 Hecw1Q8K4P8 1604 aa20.33■□□□□ 0.85
Tpm3-201ENSMUST00000029549 PtprgQ05909 1442 aa20.32■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Plppr3Q7TPB0 716 aa20.31■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Cdc42bpbQ7TT50 1713 aa20.3■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Rgl3Q3UYI5 709 aa20.29■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Ncoa1P70365 1447 aa20.28■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Prdm16A2A935 1275 aa20.28■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Mbd5B1AYB6 1498 aa20.28■□□□□ 0.84
Tpm3-201ENSMUST00000029549 Asxl1P59598 1514 aa20.24■□□□□ 0.83
Tpm3-201ENSMUST00000029549 Smg6P61406 1418 aaKnown RBP20.24■□□□□ 0.83
Tpm3-201ENSMUST00000029549 Ptch1Q61115 1434 aa20.23■□□□□ 0.83
Tpm3-201ENSMUST00000029549 Dapk1Q80YE7 1442 aa20.22■□□□□ 0.83
Tpm3-201ENSMUST00000029549 Cul9Q80TT8 1865 aa20.21■□□□□ 0.83
Tpm3-201ENSMUST00000029549 Map3k5O35099 1380 aa20.21■□□□□ 0.83
Tpm3-201ENSMUST00000029549 Mug2P28666 1451 aa20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Spag9Q58A65 1321 aaKnown RBP20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Dot1lQ6XZL8 1540 aa20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Zbtb7cQ8VCZ7 619 aa20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Lemd3Q9WU40 921 aa20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Rock1P70335 1354 aa20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Cd109Q8R422 1442 aa20.2■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Stra8P70278 393 aa20.19■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Cwc22Q8C5N3 908 aaKnown RBP20.19■□□□□ 0.82
Tpm3-201ENSMUST00000029549 OvosQ3UU35 1456 aa20.18■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Myom3A2ABU4 1439 aa20.18■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Kiaa0556Q8C753 1610 aa20.17■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Yeats2Q3TUF7 1407 aa20.17■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Rundc1Q0VDN7 615 aa20.16■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Cpsf1Q9EPU4 1441 aaKnown RBP20.15■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Hecw2Q6I6G8 1578 aa20.15■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Atp7aQ64430 1491 aa20.15■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Qser1A2BIE1 1698 aa20.15■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Dip2cE9PWR4 1557 aa20.15■□□□□ 0.82
Tpm3-201ENSMUST00000029549 Kdm5cP41230 1554 aa20.14■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Pde4cQ3UEI1 686 aa20.13■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Polr3aB2RXC6 1390 aa20.13■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Grwd1Q810D6 446 aaKnown RBP20.12■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Card11Q8CIS0 1159 aa20.12■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Naip6Q9JIB6 1403 aa20.12■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Robo2Q7TPD3 1470 aa20.12■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Iqgap1Q9JKF1 1657 aaKnown RBP20.11■□□□□ 0.81
Tpm3-201ENSMUST00000029549 RereQ80TZ9 1558 aa20.11■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Abca17E9PX95 1733 aa20.11■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Xrn1P97789 1719 aaKnown RBP20.11■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Plekhg5Q66T02 1073 aa20.1■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Ppip5k1A2ARP1 1436 aa20.1■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Cdk13Q69ZA1 1511 aaKnown RBP20.1■□□□□ 0.81
Tpm3-201ENSMUST00000029549 RalgapbQ8BQZ4 1484 aa20.09■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Washc2Q6PGL7 1334 aa20.09■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Hnrnpul2Q00PI9 745 aaKnown RBP20.08■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Usp54Q8BL06 1588 aaKnown RBP20.08■□□□□ 0.81
Tpm3-201ENSMUST00000029549 Csrnp3P59055 597 aa20.08■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Synj2Q9D2G5 1434 aa20.08■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Kif1bQ60575 1816 aaKnown RBP20.08■□□□□ 0.8
Tpm3-201ENSMUST00000029549 ShprhQ7TPQ3 1674 aa20.07■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Tarbp1E9Q368 1579 aa20.07■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Hdac5Q9Z2V6 1113 aa20.06■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Gm13695A2AK44 830 aa20.04■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Tnnt3Q9QZ47 272 aa20.04■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Nsd2Q8BVE8 1365 aa20.04■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Atp10aO54827 1508 aa20.04■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Cfap65Q3V0B4 1847 aa20.03■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Znf710Q3U288 666 aa20.02■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Nos1Q9Z0J4 1429 aa20.02■□□□□ 0.8
Tpm3-201ENSMUST00000029549 Edc4Q3UJB9 1406 aaKnown RBP20.01■□□□□ 0.79
Tpm3-201ENSMUST00000029549 Rock2P70336 1388 aa20.01■□□□□ 0.79
Tpm3-201ENSMUST00000029549 Myo5cE9Q1F5 1742 aa19.97■□□□□ 0.79
Tpm3-201ENSMUST00000029549 Kif3bQ61771 747 aa19.96■□□□□ 0.79
Tpm3-201ENSMUST00000029549 Ylpm1Q9R0I7 1386 aaKnown RBP19.96■□□□□ 0.79
Tpm3-201ENSMUST00000029549 Adamts13Q769J6 1426 aa19.95■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Znf518aB2RRF6 1478 aaKnown RBP19.94■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Mroh3A0A1D5RM54 893 aa19.94■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Ifit1bl1D3Z6F0 470 aa19.94■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Cdc42bpgQ80UW5 1551 aa19.92■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Alpk3Q924C5 1678 aa19.92■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Gli2Q0VGT2 1544 aa19.92■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Mrs2Q5NCE8 434 aa19.92■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Adamtsl3G3UXC7 1706 aa19.92■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Wwc2Q6NXJ0 1187 aa19.91■□□□□ 0.78
Tpm3-201ENSMUST00000029549 NpatQ8BMA5 1420 aa19.91■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Exoc6Q8R313 802 aa19.9■□□□□ 0.78
Tpm3-201ENSMUST00000029549 Setd1aE9PYH6 1716 aa19.89■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Slc4a2P13808 1237 aaKnown RBP19.87■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Tulp4Q9JIL5 1547 aa19.87■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Trpm1Q2TV84 1622 aa19.87■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Ttc21bQ0HA38 1315 aa19.87■□□□□ 0.77
Tpm3-201ENSMUST00000029549 PnisrA2AJT4 805 aaKnown RBP19.87■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Zmym4A2A791 1549 aaKnown RBP19.86■□□□□ 0.77
Tpm3-201ENSMUST00000029549 AnkarA2RT91 1465 aa19.86■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Erich6D3Z6S9 713 aa19.86■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Slc24a1Q91WD8 1130 aa19.86■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Aplp2Q06335 707 aa19.84■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Plch2A2AP18 1501 aa19.84■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Tmem131lQ3U3D7 1597 aa19.84■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Topbp1Q6ZQF0 1515 aa19.84■□□□□ 0.77
Tpm3-201ENSMUST00000029549 Abcc6Q9R1S7 1498 aa19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms