RNA–Protein interactions for RNA: YAL014C

SYN8, Transcript of Endosomal SNARE related to mammalian syntaxin 8, yeast

Gene SYN8, Length 768 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYN8	YAL014C	SDC1	Q03323	175 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	YDR124W	Q04608	324 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	PAL1	Q05518	499 aa	Known RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	DCR2	Q05924	578 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	YLR036C	Q07986	203 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	DIA2	Q08496	732 aa	Predicted RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	NCE102	Q12207	173 aa	RIP-Chip data	4.96	□□□□□ -1.62	not detected
SYN8	YAL014C	TRM13	Q12383	476 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	RAS2	P01120	322 aa	Known RBP	4.95	□□□□□ -1.62
SYN8	YAL014C	GPH1	P06738	902 aa	Known RBP	4.95	□□□□□ -1.62
SYN8	YAL014C	CTA1	P15202	515 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	AAC3	P18238	307 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	RVS161	P25343	265 aa	Known RBP	4.95	□□□□□ -1.62
SYN8	YAL014C	ILV6	P25605	309 aa	Known RBP	4.95	□□□□□ -1.62
SYN8	YAL014C	FEN2	P25621	512 aa	Known RBP	4.95	□□□□□ -1.62
SYN8	YAL014C	RSM22	P36056	628 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	YIL067C	P40514	678 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	SMK1	P41808	388 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	PSA1	P41940	361 aa	Known RBP	4.95	□□□□□ -1.62
SYN8	YAL014C	MRPL13	Q02204	264 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	NUP116	Q02630	1113 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	RPM2	Q02773	1202 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	GLO2	Q05584	274 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	VPS74	Q06385	345 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	ATG34	Q12292	412 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	SPE4	Q12455	300 aa		4.95	□□□□□ -1.62
SYN8	YAL014C	ADE5,7	P07244	802 aa	Known RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	TRP4	P07285	380 aa	Predicted RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	PET111	P08468	800 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	UNG1	P12887	359 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	CLB4	P24871	460 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	RPT5	P33297	434 aa	Known RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	TOD6	P34219	525 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	CAF4	P36130	643 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	MAL32	P38158	584 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	YBL029W	P38201	376 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	STP2	P38704	541 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	FAD1	P38913	306 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	RIC1	P40395	1056 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	PFK26	P40433	827 aa	Known RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	ARC1	P46672	376 aa	Known RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	TAF6	P53040	516 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	YGR066C	P53242	292 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	YNR068C	P53754	272 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	GOR1	P53839	350 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	TIM10	P87108	93 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	YMR010W	Q03687	405 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	INP1	Q03694	420 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	ECM11	Q04110	302 aa		4.94	□□□□□ -1.62
SYN8	YAL014C	ERB1	Q04660	807 aa	Known RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	FOL3	Q12676	427 aa	Predicted RBP	4.94	□□□□□ -1.62
SYN8	YAL014C	YPR096C	O13587	100 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	CBP6	P07253	162 aa	Predicted RBP	4.93	□□□□□ -1.62
SYN8	YAL014C	BAR1	P12630	587 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	YEF1	P32622	495 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	YGP1	P38616	354 aa	Known RBP	4.93	□□□□□ -1.62
SYN8	YAL014C	YHR177W	P38867	453 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	PTH1	P38876	190 aa	Known RBP	4.93	□□□□□ -1.62
SYN8	YAL014C	YJL193W	P39542	402 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	YER010C	P40011	234 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	YNL010W	P53981	241 aa	Known RBP	4.93	□□□□□ -1.62
SYN8	YAL014C	REX2	P54964	269 aa	Known RBP	4.93	□□□□□ -1.62
SYN8	YAL014C	TVP15	Q03860	143 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	HRI1	Q05905	244 aa	Known RBP	4.93	□□□□□ -1.62
SYN8	YAL014C	RSA1	Q08932	381 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	SNF8	Q12483	233 aa		4.93	□□□□□ -1.62
SYN8	YAL014C	YLR358C	O13565	187 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	MET2	P08465	486 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	PDA1	P16387	420 aa	Known RBP	4.92	□□□□□ -1.62
SYN8	YAL014C	YAP1	P19880	650 aa	Known RBP	4.92	□□□□□ -1.62
SYN8	YAL014C	RER1	P25560	188 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	MSS1	P32559	526 aa	Predicted RBP	4.92	□□□□□ -1.62
SYN8	YAL014C	SLC1	P33333	303 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	PTC1	P35182	281 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	TDP1	P38319	544 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	YMR262W	P38430	313 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	ANS1	P38832	159 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	ECM10	P39987	644 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	GAT2	P40209	560 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	NAS6	P50086	228 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	UBC11	P52492	156 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	SWP1	Q02795	286 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	NCE101	Q02820	53 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	DLT1	Q04216	342 aa		4.92	□□□□□ -1.62
SYN8	YAL014C	YMR310C	Q04867	317 aa	Predicted RBP	4.92	□□□□□ -1.62
SYN8	YAL014C	ARG81	P05085	880 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	CDC36	P06100	191 aa	Predicted RBP	4.91	□□□□□ -1.62
SYN8	YAL014C	HEM4	P06174	275 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	GAL3	P13045	520 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	RPI1	P23250	407 aa	Known RBP	4.91	□□□□□ -1.62
SYN8	YAL014C	DBR1	P24309	405 aa	Known RBP	4.91	□□□□□ -1.62
SYN8	YAL014C	SCO2	P38072	301 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	ARN2	P38724	620 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	NSG1	P38837	291 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	SHO1	P40073	367 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	YNL208W	P40159	199 aa	Known RBP	4.91	□□□□□ -1.62
SYN8	YAL014C	PIG2	P40187	538 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	YMR144W	P40214	342 aa	Known RBP	4.91	□□□□□ -1.62
SYN8	YAL014C	ALG5	P40350	334 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	LAS21	P40367	830 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 98.1 ms