RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 KCTD17Q8N5Z5 321 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 RAD54LQ92698 747 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 C16orf45Q96MC5 204 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-224ENST00000641711 PANX2Q96RD6 677 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 C16orf70Q9BSU1 422 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 SENP6Q9GZR1 1112 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-224ENST00000641711 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
PHGDH-224ENST00000641711 EXOC1Q9NV70 894 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 PCDHA12Q9UN75 941 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 COL1A2P08123 1366 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 TRIP12Q14669 1992 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-224ENST00000641711 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
PHGDH-224ENST00000641711 BRCA2P51587 3418 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 BICDL2A1A5D9 508 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 MYMKA6NI61 221 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 TLR3O15455 904 aaKnown RBP11.34□□□□□ -0.59
PHGDH-224ENST00000641711 TEX33O43247 280 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 CCNE2O96020 404 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 GNAT1P11488 350 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 FECHP22830 423 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 CCNE1P24864 410 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 EEF1GP26641 437 aaKnown RBP11.34□□□□□ -0.59
PHGDH-224ENST00000641711 HOXC8P31273 242 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 PSEN2P49810 448 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 CDK7P50613 346 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 STAT5BP51692 787 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 COPB1P53618 953 aaKnown RBP11.34□□□□□ -0.59
PHGDH-224ENST00000641711 ASIC1P78348 528 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 ITGA7Q13683 1181 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 KCNJ12Q14500 433 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 MFSD10Q14728 455 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 EPHA7Q15375 998 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 PTPN14Q15678 1187 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 HSP90AA4PQ58FG1 418 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 CEP135Q66GS9 1140 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 HAUS3Q68CZ6 603 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 ERMNQ8TAM6 284 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 SNX29Q8TEQ0 813 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
PHGDH-224ENST00000641711 KAT2BQ92831 832 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 CCDC51Q96ER9 411 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 CDK5RAP3Q96JB5 506 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 PPP1R13BQ96KQ4 1090 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 PLIN2Q99541 437 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 NT5C3AQ9H0P0 336 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 UNC45AQ9H3U1 944 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 ZNF302Q9NR11 478 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
PHGDH-224ENST00000641711 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-224ENST00000641711 POTEMA6NI47 508 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 RRN3P2A6NIE6 340 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-224ENST00000641711 DDX39AO00148 427 aaKnown RBP11.33□□□□□ -0.6
PHGDH-224ENST00000641711 BACH1O14867 736 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 HBP1O60381 514 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-224ENST00000641711 SP4Q02446 784 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 EHHADHQ08426 723 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 PSMD2Q13200 908 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 TRIM14Q14142 442 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 KIAA0753Q2KHM9 967 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 CCDC60Q8IWA6 550 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-224ENST00000641711 ATP8B4Q8TF62 1192 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 GLG1Q92896 1179 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 P2RX5Q93086 422 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 VTI1AQ96AJ9 217 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 BAG1Q99933 345 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-224ENST00000641711 NAA15Q9BXJ9 866 aaKnown RBP11.33□□□□□ -0.6
PHGDH-224ENST00000641711 BCAS3Q9H6U6 928 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 SAMM50Q9Y512 469 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■□□□□ 10.9
PHGDH-224ENST00000641711 TANC1Q9C0D5 1861 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
PHGDH-224ENST00000641711 ARID2Q68CP9 1835 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 GOLGA6L9A6NEM1 432 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 LGALS16A8MUM7 142 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 N4BP3O15049 544 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 CAND2O75155 1236 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 LYPLA2O95372 231 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 P4HBP07237 508 aaKnown RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 RTP1P59025 263 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 PSMC5P62195 406 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 RBL2Q08999 1139 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 STK4Q13043 487 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 MCM6Q14566 821 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 UTP14CQ5TAP6 766 aaKnown RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 CENPPQ6IPU0 288 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms