RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 AZI2Q9H6S1 392 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 KCNH7Q9NS40 1196 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 DZANK1Q9NVP4 752 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 IRAK3Q9Y616 596 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 TAF6LQ9Y6J9 622 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 OTOGLQ3ZCN5 2332 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 TPRP12270 2363 aaKnown RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 CEP250Q9BV73 2442 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 B4GALT3O60512 393 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 MYBP10242 640 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 CTSAP10619 480 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 FGFR4P22455 802 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 LETM2Q2VYF4 491 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
PHGDH-212ENST00000641247 CCDC149Q6ZUS6 474 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 CABP7Q86V35 215 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
PHGDH-212ENST00000641247 RNF169Q8NCN4 708 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 CDHR1Q96JP9 859 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 KLHL5Q96PQ7 755 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 MYADMQ96S97 322 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 CACNA1GO43497 2377 aa11.08□□□□□ -0.64
PHGDH-212ENST00000641247 MEIS3P2A8K0S8 358 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 MAFGO15525 162 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 LILRB3O75022 631 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 C22orf31O95567 290 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 CLCN4P51793 760 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 TRAF1Q13077 416 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 PTPN14Q15678 1187 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
PHGDH-212ENST00000641247 ABHD15Q6UXT9 468 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 CCDC60Q8IWA6 550 aaPredicted RBP11.07□□□□□ -0.64
PHGDH-212ENST00000641247 CUL5Q93034 780 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 MXRA8Q9BRK3 442 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
PHGDH-212ENST00000641247 DSCC1Q9BVC3 393 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 PCDHA6Q9UN73 950 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 SIT1Q9Y3P8 196 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 MTF2Q9Y483 593 aaPredicted RBP11.07□□□□□ -0.64
PHGDH-212ENST00000641247 PCDHA8Q9Y5H6 950 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 ACACBO00763 2458 aa11.07□□□□□ -0.64
PHGDH-212ENST00000641247 COL4A3Q01955 1670 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 hCG_1642624A0A1W2PR95 340 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 HBP1O60381 514 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 GALTP07902 379 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 ADRB1P08588 477 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 CNPP09543 421 aaKnown RBP11.06□□□□□ -0.64
PHGDH-212ENST00000641247 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-212ENST00000641247 NBR1Q14596 966 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 LONRF3Q496Y0 759 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 KIAA0319Q5VV43 1072 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 PHLDB3Q6NSJ2 640 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 TRMT1LQ7Z2T5 733 aaKnown RBP11.06□□□□□ -0.64
PHGDH-212ENST00000641247 DDX53Q86TM3 631 aaKnown RBP11.06□□□□□ -0.64
PHGDH-212ENST00000641247 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 LINC01465Q8N7H1 131 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 LPPQ93052 612 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 TMEM169Q96HH4 297 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 IGSF21Q96ID5 467 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 PSTPIP2Q9H939 334 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 SFXN1Q9H9B4 322 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 AGO4Q9HCK5 861 aaKnown RBP11.06□□□□□ -0.64
PHGDH-212ENST00000641247 PARD6AQ9NPB6 346 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 DNAJB4Q9UDY4 337 aa11.06□□□□□ -0.64
PHGDH-212ENST00000641247 A0A0U1RQF3 1178 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 IFIT3O14879 490 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 HOXA2O43364 376 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 CSDE1O75534 798 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 PLEKHA8P1O95397 391 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 SRFP11831 508 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 GBP2P32456 591 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 ALDH7A1P49419 539 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 CLCN3P51790 818 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 ANTXR2P58335 489 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 NLRP11P59045 1033 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 COL9A2Q14055 689 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 ZC3H14Q6PJT7 736 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 PLEKHM2Q8IWE5 1019 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
PHGDH-212ENST00000641247 CNNM2Q9H8M5 875 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 EPS15L1Q9UBC2 864 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 MYH6P13533 1939 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 NFASCO94856 1347 aa11.05□□□□□ -0.64
PHGDH-212ENST00000641247 BAZ2BQ9UIF8 2168 aaKnown RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 WDR87Q6ZQQ6 2873 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 KINO60870 393 aaKnown RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 RFPL2O75678 378 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms