RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
CLK4-215ENST00000611733 DNAJB3Q8WWF6 145 aa13.37□□□□□ -0.27
CLK4-215ENST00000611733 PRPF31Q8WWY3 499 aaKnown RBP13.37□□□□□ -0.27
CLK4-215ENST00000611733 FGFBP2Q9BYJ0 223 aa13.37□□□□□ -0.27
CLK4-215ENST00000611733 PANK4Q9NVE7 773 aa13.37□□□□□ -0.27
CLK4-215ENST00000611733 PCDHA2Q9Y5H9 948 aa13.37□□□□□ -0.27
CLK4-215ENST00000611733 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 MKI67P46013 3256 aaKnown RBP13.36□□□□□ -0.27
CLK4-215ENST00000611733 MAGEB2O15479 319 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 GLRA2P23416 452 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 CNNM4Q6P4Q7 775 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 UBE2Q1Q7Z7E8 422 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 DHX38Q92620 1227 aaKnown RBP13.36□□□□□ -0.27
CLK4-215ENST00000611733 KCND2Q9NZV8 630 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 KIAA1468Q9P260 1216 aa13.36□□□□□ -0.27
CLK4-215ENST00000611733 SUCLA2Q9P2R7 463 aaPredicted RBP13.36□□□□□ -0.27
CLK4-215ENST00000611733 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
CLK4-215ENST00000611733 FRMD3A2A2Y4 597 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 GNAT1P11488 350 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 LRRC26Q2I0M4 334 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 SFR1Q86XK3 245 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 RHPN2Q8IUC4 686 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 MYCT1Q8N699 235 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 MCPH1Q8NEM0 835 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
CLK4-215ENST00000611733 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 PPME1Q9Y570 386 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 PQBP1O60828 265 aaKnown RBP13.35□□□□□ -0.27
CLK4-215ENST00000611733 FAM13AO94988 1023 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 BMP6P22004 513 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 ZNF131P52739 623 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
CLK4-215ENST00000611733 EHHADHQ08426 723 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 COASYQ13057 564 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 TRIM60Q495X7 471 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 HERC4Q5GLZ8 1057 aaPredicted RBP13.35□□□□□ -0.27
CLK4-215ENST00000611733 IER5Q5VY09 327 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 UNC13DQ70J99 1090 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 SERINC5Q86VE9 423 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 FAM126BQ8IXS8 530 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 RETREG2Q8NC44 543 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 FIZ1Q96SL8 496 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 MAN1B1Q9UKM7 699 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 AKT3Q9Y243 479 aa13.35□□□□□ -0.27
CLK4-215ENST00000611733 SMIM35A0A1B0GVV1 85 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 NMT1P30419 496 aaKnown RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 PEX3P56589 373 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 TLE2Q04725 743 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 STK4Q13043 487 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 RBM43Q6ZSC3 357 aaKnown RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 SMYD4Q8IYR2 804 aaPredicted RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 OSBPL7Q9BZF2 842 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 ODF2LQ9ULJ1 636 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 PVALEFA0A1B0GWK0 134 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 TBCAO75347 108 aaKnown RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 CSDE1O75534 798 aaKnown RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 CD4P01730 458 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 MYL1P05976 194 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 PLS3P13797 630 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 NPTX2P47972 431 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 CASP5P51878 434 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 CAPSQ13938 189 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 SNX17Q15036 470 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 ODR4Q5SWX8 454 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 NT5DC1Q5TFE4 455 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 TNS4Q8IZW8 715 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 PSPC1Q8WXF1 523 aaKnown RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 KIFAP3Q92845 792 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 PARVGQ9HBI0 331 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 HOOK1Q9UJC3 728 aaKnown RBP13.34□□□□□ -0.27
CLK4-215ENST00000611733 GDAQ9Y2T3 454 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 EVPLQ92817 2033 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 ADGRA3Q8IWK6 1321 aa13.34□□□□□ -0.27
CLK4-215ENST00000611733 CCDC169A6NNP5 214 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 SLC16A4O15374 487 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 DNM2P50570 870 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 NLRP11P59045 1033 aaKnown RBP13.33□□□□□ -0.28
CLK4-215ENST00000611733 KIZQ2M2Z5 673 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
CLK4-215ENST00000611733 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
CLK4-215ENST00000611733 CCDC65Q8IXS2 484 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 DRC1Q96MC2 740 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
CLK4-215ENST00000611733 TIPINQ9BVW5 301 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
CLK4-215ENST00000611733 GINS2Q9Y248 185 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms