RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 FAM49AQ9H0Q0 323 aaPredicted RBP13.2□□□□□ -0.3
VPS45-212ENST00000611412 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 NRCAMQ92823 1304 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 COL1A2P08123 1366 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 DNM1LO00429 736 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 RHOBTB3O94955 611 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 CASP5P51878 434 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 NLRP12P59046 1061 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 ITGA7Q13683 1181 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 KCNB1Q14721 858 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
VPS45-212ENST00000611412 KIAA0895Q8NCT3 520 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 CCDC47Q96A33 483 aaKnown RBP13.2□□□□□ -0.3
VPS45-212ENST00000611412 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
VPS45-212ENST00000611412 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 RMND1Q9NWS8 449 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
VPS45-212ENST00000611412 IGKV6-21A0A0C4DH24 114 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 RRN3P2A6NIE6 340 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 MYBP10242 640 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 CYP2C9P11712 490 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 GLRA2P23416 452 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 ZNF131P52739 623 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 EHHADHQ08426 723 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 TMEM62Q0P6H9 643 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 FAM26FQ5R3K3 315 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 SUCLA2Q9P2R7 463 aaPredicted RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 GTF2IRD1Q9UHL9 959 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 AKT3Q9Y243 479 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 CCDC169A6NNP5 214 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 VTNP04004 478 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 CCDC192P0DO97 292 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 PLS3P13797 630 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 ARL2P36404 184 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 STX1AQ16623 288 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 ZC2HC1CQ53FD0 456 aaPredicted RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 ZNF658Q5TYW1 1059 aaPredicted RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 KLHL10Q6JEL2 608 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 FAM178BQ8IXR5 827 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 KIFAP3Q92845 792 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 SENP6Q9GZR1 1112 aaPredicted RBP13.19□□□□□ -0.3
VPS45-212ENST00000611412 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
VPS45-212ENST00000611412 KAT6AQ92794 2004 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 EVPLQ92817 2033 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 MYH11P35749 1972 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
VPS45-212ENST00000611412 SLC16A4O15374 487 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 MAGEB2O15479 319 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 CABYRO75952 493 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 GCNT3O95395 438 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 SRGAP2CP0DJJ0 459 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 GAP43P17677 238 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 NPTX2P47972 431 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
VPS45-212ENST00000611412 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
VPS45-212ENST00000611412 ZNF445P59923 1031 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 ADAM17P78536 824 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
VPS45-212ENST00000611412 LINC01465Q8N7H1 131 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 TIPINQ9BVW5 301 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 TRMT13Q9NUP7 481 aaKnown RBP13.18□□□□□ -0.3
VPS45-212ENST00000611412 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
VPS45-212ENST00000611412 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
VPS45-212ENST00000611412 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 K7ENM7 598 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 PRPF6O94906 941 aaKnown RBP13.17□□□□□ -0.3
VPS45-212ENST00000611412 PRCPP42785 496 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 GJA8P48165 433 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 LAMTOR4Q0VGL1 99 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 CAPSQ13938 189 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 IER5Q5VY09 327 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 TRIML1Q8N9V2 468 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
VPS45-212ENST00000611412 WNT8BQ93098 351 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
VPS45-212ENST00000611412 TMEM106CQ9BVX2 250 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 IKZF4Q9H2S9 585 aa13.17□□□□□ -0.3
VPS45-212ENST00000611412 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms