RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 EIF4BP23588 611 aaKnown RBP16.1■□□□□ 0.17
TUBE1-204ENST00000603621 PTGDRQ13258 359 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 KSR1Q8IVT5 923 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 NEK9Q8TD19 979 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 PIGOQ8TEQ8 1089 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 NLRP4Q96MN2 994 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 TGS1Q96RS0 853 aaKnown RBP16.1■□□□□ 0.17
TUBE1-204ENST00000603621 ADAM2Q99965 735 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 FDXACB1Q9BRP7 624 aaPredicted RBP16.1■□□□□ 0.17
TUBE1-204ENST00000603621 TSPYL2Q9H2G4 693 aaPredicted RBP16.1■□□□□ 0.17
TUBE1-204ENST00000603621 LRFN2Q9ULH4 789 aa16.1■□□□□ 0.17
TUBE1-204ENST00000603621 PRRC2BQ5JSZ5 2229 aaKnown RBP16.1■□□□□ 0.17
TUBE1-204ENST00000603621 COL4A4P53420 1690 aaPredicted RBP16.09■□□□□ 0.17
TUBE1-204ENST00000603621 MED24O75448 989 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 RFC5P40937 340 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 CUL4AQ13619 759 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 EMC2Q15006 297 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 EXOC8Q8IYI6 725 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 ZNF710Q8N1W2 664 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 C4orf32Q8N8J7 132 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 SLC17A8Q8NDX2 589 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 GDPD5Q8WTR4 605 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 C17orf80Q9BSJ5 609 aa16.09■□□□□ 0.17
TUBE1-204ENST00000603621 GCOM2Q9BZD3 368 aaPredicted RBP16.09■□□□□ 0.17
TUBE1-204ENST00000603621 TRANK1O15050 2925 aa16.08■□□□□ 0.17
TUBE1-204ENST00000603621 EYSQ5T1H1 3165 aa16.08■□□□□ 0.17
TUBE1-204ENST00000603621 VPS37CA5D8V6 355 aaPredicted RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 LYPLA2O95372 231 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 STAG3L1P0CL83 205 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 SRGAP2CP0DJJ0 459 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 SPATA31C1P0DKV0 1188 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 ERVK-21P61565 698 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 CDC42EP1Q00587 391 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 PAN2Q504Q3 1202 aaKnown RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 CATSPER3Q86XQ3 398 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 NPAS4Q8IUM7 802 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 FIBCD1Q8N539 461 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 SP7Q8TDD2 431 aaPredicted RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 MTRQ99707 1265 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 DHX33Q9H6R0 707 aaKnown RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 RGS18Q9NS28 235 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 ANKEF1Q9NU02 776 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 PPME1Q9Y570 386 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 COL4A3BPQ9Y5P4 624 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 RALGAPA2Q2PPJ7 1873 aa16.08■□□□□ 0.16
TUBE1-204ENST00000603621 FNDC1Q4ZHG4 1894 aaPredicted RBP16.08■□□□□ 0.16
TUBE1-204ENST00000603621 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-204ENST00000603621 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
TUBE1-204ENST00000603621 GATMP50440 423 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 GRB10Q13322 594 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 BTG3Q14201 252 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-204ENST00000603621 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 POTEGQ6S5H5 508 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 SLC24A5Q71RS6 500 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 FBXO22Q8NEZ5 403 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 PRPF31Q8WWY3 499 aaKnown RBP16.07■□□□□ 0.16
TUBE1-204ENST00000603621 PSPC1Q8WXF1 523 aaKnown RBP16.07■□□□□ 0.16
TUBE1-204ENST00000603621 TUFT1Q9NNX1 390 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
TUBE1-204ENST00000603621 C1orf112Q9NSG2 853 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 ADGRA3Q8IWK6 1321 aa16.07■□□□□ 0.16
TUBE1-204ENST00000603621 KIAA1671Q9BY89 1806 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 K7ELQ4 463 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-204ENST00000603621 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
TUBE1-204ENST00000603621 DGKIO75912 1065 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 CCT6AP40227 531 aaKnown RBP16.06■□□□□ 0.16
TUBE1-204ENST00000603621 RARRES1P49788 294 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
TUBE1-204ENST00000603621 LAMTOR4Q0VGL1 99 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 MAEAQ7L5Y9 396 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 ZNF410Q86VK4 478 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 TCP11Q8WWU5 503 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 ZNF689Q96CS4 500 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-204ENST00000603621 POLR3CQ9BUI4 534 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-204ENST00000603621 ATP6V0A4Q9HBG4 840 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 XPNPEP1Q9NQW7 623 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 PRUNE2Q8WUY3 3088 aa16.06■□□□□ 0.16
TUBE1-204ENST00000603621 C9IYK1 514 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 DGAT1O75907 488 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
TUBE1-204ENST00000603621 RPA1P27694 616 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 CTNNB1P35222 781 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 DSC3Q14574 896 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 EPC2Q52LR7 807 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 HAUS3Q68CZ6 603 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 CATSPER4Q7RTX7 472 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 TMEM192Q8IY95 271 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 RAB34Q9BZG1 259 aa16.05■□□□□ 0.16
TUBE1-204ENST00000603621 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
TUBE1-204ENST00000603621 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms