RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FAM178BQ8IXR5 827 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 OR2W6PQ8NHA6 318 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 PRMT6Q96LA8 375 aaPredicted RBP22■■□□□ 1.11
SHKBP1-225ENST00000600733 ATP6V1G3Q96LB4 118 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 ZNF646O15015 1829 aaPredicted RBP22■■□□□ 1.11
SHKBP1-225ENST00000600733 ATP8B3O60423 1300 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 BUB1BO60566 1050 aaPredicted RBP22■■□□□ 1.11
SHKBP1-225ENST00000600733 GAS7O60861 476 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 FKBP1AP62942 108 aaKnown RBP22■■□□□ 1.11
SHKBP1-225ENST00000600733 UAP1Q16222 522 aaPredicted RBP22■■□□□ 1.11
SHKBP1-225ENST00000600733 RASGEF1CQ8N431 466 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 SLC5A5Q92911 643 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 HES6Q96HZ4 224 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 STK33Q9BYT3 514 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 GPR88Q9GZN0 384 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 AGPAT3Q9NRZ7 376 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 FAM169AQ9Y6X4 670 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 RBBP6Q7Z6E9 1792 aaKnown RBP22■■□□□ 1.11
SHKBP1-225ENST00000600733 FRMPD4Q14CM0 1322 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 NDUFAB1O14561 156 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 FLT3P36888 993 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 PRELPP51888 382 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 SAMD1Q6SPF0 538 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 SYCE1Q8N0S2 351 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 SLC35G2Q8TBE7 412 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 CENPHQ9H3R5 247 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 SF3B2Q13435 895 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 AOC3Q16853 763 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 ODR4Q5SWX8 454 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 HS2ST1Q7LGA3 356 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 EFCAB13Q8IY85 973 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 BANK1Q8NDB2 785 aa21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 CELF4Q9BZC1 486 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-225ENST00000600733 BHMG1C9JSJ3 638 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 CCDC188H7C350 402 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 GCOM1H8Y6P7 765 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 TTI1O43156 1089 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 DAPK3O43293 454 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 POLR2MP0CAP2 368 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 LSP1P33241 339 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 NPEPPSP55786 919 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 NFIL3Q16649 462 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 PACS2Q86VP3 889 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 KCTD17Q8N5Z5 321 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 EIF1ADQ8N9N8 165 aaKnown RBP21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 RDH13Q8NBN7 331 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 PPM1EQ8WY54 764 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 MKNK1Q9BUB5 465 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 PPP1R9AQ9ULJ8 1098 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 FRMD4BQ9Y2L6 1034 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 MYH11P35749 1972 aa21.98■■□□□ 1.11
SHKBP1-225ENST00000600733 ENTPD3O75355 529 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 ARP10275 920 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 LMNB1P20700 586 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 ZNF131P52739 623 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 PLS1Q14651 629 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 PALB2Q86YC2 1186 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 SYT11Q9BT88 431 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 INTS2Q9H0H0 1204 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 UNC45AQ9H3U1 944 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 TAS2R14Q9NYV8 317 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 AMFRQ9UKV5 643 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 BCS1LQ9Y276 419 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 NR2E1Q9Y466 385 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 A6NNZ2 444 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 H0YGN5 161 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 PPARDQ03181 441 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 ARHGAP44Q17R89 818 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 TUBB8Q3ZCM7 444 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 CEP55Q53EZ4 464 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 NAA35Q5VZE5 725 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 RFFLQ8WZ73 363 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 DMAC2Q9NW81 257 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 NFS1Q9Y697 457 aa21.97■■□□□ 1.11
SHKBP1-225ENST00000600733 HMGB1P1B2RPK0 211 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 FGGP02679 453 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 HPDP32754 393 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 ITGB3BPQ13352 177 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 DCAF12L1Q5VU92 463 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 ARHGEF26Q96DR7 871 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 NACC1Q96RE7 527 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 ZNF577Q9BSK1 485 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 TMBIM4Q9HC24 238 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 SEPT11Q9NVA2 429 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 APEX2Q9UBZ4 518 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 NCANO14594 1321 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 TCP10L2B9ZVM9 353 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 LRRN2O75325 713 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 CTNNA1P35221 906 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 MYL7Q01449 175 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 EMC10Q5UCC4 262 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 KRT27Q7Z3Y8 459 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 TADA2BQ86TJ2 420 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 BBXQ8WY36 941 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 CTNNBL1Q8WYA6 563 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 LXNQ9BS40 222 aa21.96■■□□□ 1.11
SHKBP1-225ENST00000600733 SEL1LQ9UBV2 794 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms