RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 SCN5AQ14524 2016 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 GPR182O15218 404 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 USO1O60763 962 aaKnown RBP15.36■□□□□ 0.05
SNRPA-208ENST00000600456 CYP11B2P19099 503 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 EIF4BP23588 611 aaKnown RBP15.36■□□□□ 0.05
SNRPA-208ENST00000600456 TXLNAP40222 546 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 KCNJ6P48051 423 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 GRIN1Q05586 938 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 PAK2Q13177 524 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 MXD4Q14582 209 aaPredicted RBP15.36■□□□□ 0.05
SNRPA-208ENST00000600456 TMEM119Q4V9L6 283 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 PADI6Q6TGC4 694 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 RHPN2Q8IUC4 686 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 PHOSPHO2Q8TCD6 241 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 PRPF31Q8WWY3 499 aaKnown RBP15.36■□□□□ 0.05
SNRPA-208ENST00000600456 NLRP7Q8WX94 980 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 PNMA5Q96PV4 448 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 OSMRQ99650 979 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 FTHL17Q9BXU8 183 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 GCOM2Q9BZD3 368 aaPredicted RBP15.36■□□□□ 0.05
SNRPA-208ENST00000600456 OSBPL7Q9BZF2 842 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 AGO3Q9H9G7 860 aaKnown RBP15.36■□□□□ 0.05
SNRPA-208ENST00000600456 CDHR5Q9HBB8 845 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 COL4A3BPQ9Y5P4 624 aa15.36■□□□□ 0.05
SNRPA-208ENST00000600456 A0A087WWV3 80 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 RPS6KA5O75582 802 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 DARSP14868 501 aaKnown RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 CD52P31358 61 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 ARL2P36404 184 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 KRT85P78386 507 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 SMAD3P84022 425 aaKnown RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 DNM1Q05193 864 aaKnown RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 LAMTOR4Q0VGL1 99 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 GRB10Q13322 594 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 RASSF8Q8NHQ8 419 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 TMEM40Q8WWA1 233 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 PPP1R16BQ96T49 567 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 ERVK-5Q9HDB9 667 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
SNRPA-208ENST00000600456 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 PADI3Q9ULW8 664 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 ARID2Q68CP9 1835 aa15.35■□□□□ 0.05
SNRPA-208ENST00000600456 A0A087WZ62 844 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 E9PMD0 336 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 CUTAO60888 179 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 AMHP03971 560 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 ATP2A2P16615 1042 aaKnown RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 WDR5P61964 334 aaKnown RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 TFDP1Q14186 410 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 FOXD4L6Q3SYB3 417 aaPredicted RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 FOXD4L3Q6VB84 417 aaPredicted RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 KCNK18Q7Z418 384 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 SYMPKQ92797 1274 aaKnown RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 NLRP4Q96MN2 994 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 CLIC6Q96NY7 704 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 TIPINQ9BVW5 301 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 KCND2Q9NZV8 630 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 RCOR1Q9UKL0 485 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 NOC2LQ9Y3T9 749 aaKnown RBP15.34■□□□□ 0.05
SNRPA-208ENST00000600456 MYH15Q9Y2K3 1946 aa15.34■□□□□ 0.05
SNRPA-208ENST00000600456 SIP14410 1827 aa15.33■□□□□ 0.05
SNRPA-208ENST00000600456 PLCG1P19174 1290 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 SFPQP23246 707 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNRPA-208ENST00000600456 PHKA2P46019 1235 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 KARSQ15046 597 aaKnown RBP15.33■□□□□ 0.04
SNRPA-208ENST00000600456 SRGAP1Q7Z6B7 1085 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 FAM228AQ86W67 206 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
SNRPA-208ENST00000600456 KSR1Q8IVT5 923 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 SYT2Q8N9I0 419 aaPredicted RBP15.33■□□□□ 0.04
SNRPA-208ENST00000600456 EPSTI1Q96J88 318 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 POLR3FQ9H1D9 316 aaPredicted RBP15.33■□□□□ 0.04
SNRPA-208ENST00000600456 STK17AQ9UEE5 414 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
SNRPA-208ENST00000600456 ST3GAL5Q9UNP4 418 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 EVPLQ92817 2033 aa15.33■□□□□ 0.04
SNRPA-208ENST00000600456 TET1Q8NFU7 2136 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 PLA2G4BP0C869 781 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 SRGAP2CP0DJJ0 459 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 GUCY2CP25092 1073 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 ME1P48163 572 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 NFX1Q12986 1120 aaKnown RBP15.32■□□□□ 0.04
SNRPA-208ENST00000600456 PPP2R5AQ15172 486 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.045e-7■■■■□ 20.2
SNRPA-208ENST00000600456 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 RINT1Q6NUQ1 792 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 GPR153Q6NV75 609 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 USP49Q70CQ1 688 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 HERC6Q8IVU3 1022 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 RNF149Q8NC42 400 aa15.32■□□□□ 0.04
SNRPA-208ENST00000600456 ASAP3Q8TDY4 903 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms