RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 LYPLA2O95372 231 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 BMP1P13497 986 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 CTNNB1P35222 781 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 RFC5P40937 340 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 NPEPPSP55786 919 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 DRP2Q13474 957 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 FAM184AQ8NB25 1140 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 SLC7A3Q8WY07 619 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 P2RX5Q93086 422 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 SH2D3AQ9BRG2 576 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 LXNQ9BS40 222 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 GCOM2Q9BZD3 368 aaPredicted RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 INO80BQ9C086 356 aaPredicted RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 TTC12Q9H892 705 aaPredicted RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 UPF2Q9HAU5 1272 aaKnown RBP11.78□□□□□ -0.52
CCDC9-203ENST00000596938 TMEM161AQ9NX61 479 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 GBF1Q92538 1859 aa11.78□□□□□ -0.52
CCDC9-203ENST00000596938 MUC3AQ02505 3323 aa11.77□□□□□ -0.52
CCDC9-203ENST00000596938 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 WNT7AO00755 349 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 ST18O60284 1047 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 XRCC6P12956 609 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 TXKP42681 527 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 FOSBP53539 338 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 GUCY1B3Q02153 619 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 CTTNQ14247 550 aaKnown RBP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 TPH2Q8IWU9 490 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 NEK9Q8TD19 979 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 SCLT1Q96NL6 688 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 EIF2AK1Q9BQI3 630 aaKnown RBP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 TRAIPQ9BWF2 469 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 ATP6V0A4Q9HBG4 840 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 CHST12Q9NRB3 414 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 MRPL42Q9Y6G3 142 aaKnown RBP11.77□□□□□ -0.53
CCDC9-203ENST00000596938 PTPRSQ13332 1948 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 CUL9Q8IWT3 2517 aa11.77□□□□□ -0.53
CCDC9-203ENST00000596938 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 A0A087WZ62 844 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 A0A0U1RQF3 1178 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 ZBTB39O15060 712 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 GRM6O15303 877 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 ASAP2O43150 1006 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 HOXA2O43364 376 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 EOMESO95936 686 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 U2AF2P26368 475 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC9-203ENST00000596938 TRAPPC10P48553 1259 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 POLGP54098 1239 aaPredicted RBP11.76□□□□□ -0.53
CCDC9-203ENST00000596938 TFF2Q03403 129 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 TIGD5Q53EQ6 642 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 FAM102BQ5T8I3 360 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 NOSTRINQ8IVI9 506 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 PRPF31Q8WWY3 499 aaKnown RBP11.76□□□□□ -0.53
CCDC9-203ENST00000596938 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
CCDC9-203ENST00000596938 FDXACB1Q9BRP7 624 aaPredicted RBP11.76□□□□□ -0.53
CCDC9-203ENST00000596938 TMEM60Q9H2L4 133 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 IFT122Q9HBG6 1241 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 ANKEF1Q9NU02 776 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 PLAGL2Q9UPG8 496 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 MYO9BQ13459 2157 aa11.76□□□□□ -0.53
CCDC9-203ENST00000596938 PRRC2BQ5JSZ5 2229 aaKnown RBP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 NCK2O43639 380 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 CSDE1O75534 798 aaKnown RBP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 ATP2B1P20020 1258 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 MCM7P33993 719 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 MCM2P49736 904 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 GATMP50440 423 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 CYP4A11Q02928 519 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 COL19A1Q14993 1142 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 PAN2Q504Q3 1202 aaKnown RBP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 XKR9Q5GH70 373 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 ECHDC2Q86YB7 292 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 KSR1Q8IVT5 923 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 TCP11Q8WWU5 503 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 PSPC1Q8WXF1 523 aaKnown RBP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 TMEM117Q9H0C3 514 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 NSUN3Q9H649 340 aaKnown RBP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 TYW1Q9NV66 732 aaKnown RBP11.75□□□□□ -0.53
CCDC9-203ENST00000596938 KIF3AQ9Y496 699 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 TTC3P53804 2025 aa11.75□□□□□ -0.53
CCDC9-203ENST00000596938 TBKBP1A7MCY6 615 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms