RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 CHST12Q9NRB3 414 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ST7Q9NRC1 585 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 COL1A2P08123 1366 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 MRC1P22897 1456 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 DUOX1Q9NRD9 1551 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 VWA5AO00534 786 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 DUSP11O75319 330 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 DDX5P17844 614 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 MAN1A1P33908 653 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 CYP2J2P51589 502 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 MAP7Q14244 749 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 DUOXA2Q1HG44 320 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF697Q5TEC3 545 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 DYMQ7RTS9 669 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF467Q7Z7K2 595 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF512Q96ME7 567 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 SENP7Q9BQF6 1050 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 CCDC68Q9H2F9 335 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 DDX20Q9UHI6 824 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 CLTAP09496 248 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 INPP5BP32019 993 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ACADSBP45954 432 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PABPC1LQ4VXU2 614 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ENAHQ8N8S7 591 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF579Q8NAF0 562 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 OR6B3Q8NGW1 331 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 CCT6BQ92526 530 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 USP13Q92995 863 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ANAPC5Q9UJX4 755 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 KLRG2A4D1S0 409 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PI4K2BG5E9Z4 385 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 AP3B1O00203 1094 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 POLR2DO15514 142 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 CYP21A2P08686 494 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 TMEM132DQ14C87 1099 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 SFMBT2Q5VUG0 894 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 TTBK2Q6IQ55 1244 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PDE12Q6L8Q7 609 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 CYFIP1Q7L576 1253 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 TMC7Q7Z402 723 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 FAM186BQ8IYM0 893 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 RAB3IL1Q8TBN0 382 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 MKL1Q969V6 931 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 P2RX7Q99572 595 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 RAB20Q9NX57 234 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 SYNRGQ9UMZ2 1314 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 SEPT4O43236 478 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 LUC7L3O95232 432 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ETFBP38117 255 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PTGISQ16647 500 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 C10orf76Q5T2E6 689 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ACBD5Q5T8D3 534 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 OLFML2BQ68BL8 750 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 XXYLT1Q8NBI6 393 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PXYLP1Q8TE99 480 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 RNPC3Q96LT9 517 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 SLC38A10Q9HBR0 1119 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 JADE2Q9NQC1 790 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PCDHB4Q9Y5E5 795 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 SCINQ9Y6U3 715 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 DLATP10515 647 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 PDHBP11177 359 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 FLT3LGP49771 235 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ATXN3P54252 364 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 MLLT1Q03111 559 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 TAP1Q03518 808 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 FPGSQ05932 587 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 CALCOCO2Q13137 446 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 BBOF1Q8ND07 529 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 ATL2Q8NHH9 583 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 GRK7Q8WTQ7 553 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 DEFB118Q96PH6 123 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 POP1Q99575 1024 aaKnown RBP6.8□□□□□ -1.32
SMAD4-212ENST00000591126 HINFPQ9BQA5 517 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 TSPYL1Q9H0U9 437 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 CNTNAP2Q9UHC6 1331 aa6.8□□□□□ -1.32
SMAD4-212ENST00000591126 CASQ1P31415 396 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TUFMP49411 452 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 CAMK4Q16566 473 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TIGD5Q53EQ6 642 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 PPP1R21Q6ZMI0 780 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TBC1D19Q8N5T2 526 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 CD99L2Q8TCZ2 262 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 SHDQ96IW2 340 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 PRIMPOLQ96LW4 560 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TSSK1BQ9BXA7 367 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 KIAA1257Q9ULG3 409 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 CYP2D6P10635 497 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 SYT1P21579 422 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 YWHABP31946 246 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 MXI1P50539 228 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 RPS6P62753 249 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 STARD3Q14849 445 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 OSCP1Q8WVF1 389 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 PRDM10Q9NQV6 1147 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms