RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 TSG101Q99816 390 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 VPS16Q9H269 839 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 SPC25Q9HBM1 224 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 MAGEC2Q9UBF1 373 aaPredicted RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 DBR1Q9UK59 544 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 ODF2LQ9ULJ1 636 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 PHF24Q9UPV7 400 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 SIP14410 1827 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 ZMYM2Q9UBW7 1377 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 A0A1W2PQ45 241 aaPredicted RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 A0A1W2PQY0 241 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 RSPH10B2B2RC85 870 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 AKR1B15C9JRZ8 316 aaPredicted RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 DDX39AO00148 427 aaKnown RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 EIF3DO15371 548 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS25-205ENST00000590339 ARHGAP6O43182 974 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 PQBP1O60828 265 aaKnown RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 ATP9AO75110 1047 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 CCNE2O96020 404 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 RSPH10BP0C881 870 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 MYCLP12524 364 aaPredicted RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 KCNA2P16389 499 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 EDNRBP24530 442 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 SFNP31947 248 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 ICAM3P32942 547 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 BMP8BP34820 402 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 DNM2P50570 870 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 CASP5P51878 434 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 GOLGA8FQ08AF8 430 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 GOLGA8DPQ0D2H9 430 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 CEP135Q66GS9 1140 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 E4F1Q66K89 784 aaPredicted RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 ZNF746Q6NUN9 644 aaPredicted RBP10.38□□□□□ -0.75
VPS25-205ENST00000590339 NYAP1Q6ZVC0 841 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 NLRX1Q86UT6 975 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 TPH2Q8IWU9 490 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 BANK1Q8NDB2 785 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 KLHDC9Q8NEP7 349 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 DNERQ8NFT8 737 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 PIGOQ8TEQ8 1089 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 CCDC51Q96ER9 411 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 ERGIC2Q96RQ1 377 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 FIZ1Q96SL8 496 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 IWS1Q96ST2 819 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 TUBGCP2Q9BSJ2 902 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 KATNBL1Q9H079 304 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 ZSWIM4Q9H7M6 989 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 STARD7Q9NQZ5 370 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 SEL1LQ9UBV2 794 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 TRAF3IP3Q9Y228 551 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS25-205ENST00000590339 COL4A3BPQ9Y5P4 624 aa10.38□□□□□ -0.75
VPS25-205ENST00000590339 ZNF236Q9UL36 1845 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 USP27XA6NNY8 438 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 WDR64B1ANS9 1081 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 SOX1O00570 391 aaPredicted RBP10.37□□□□□ -0.75
VPS25-205ENST00000590339 NKRFO15226 690 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS25-205ENST00000590339 STX10O60499 249 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 ASGR1P07306 291 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 SMPD1P17405 629 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 HOXD13P35453 343 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 QARSP47897 775 aaKnown RBP10.37□□□□□ -0.75
VPS25-205ENST00000590339 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
VPS25-205ENST00000590339 GJA9P57773 515 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 FKBP3Q00688 224 aaKnown RBP10.37□□□□□ -0.75
VPS25-205ENST00000590339 RBL2Q08999 1139 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 RAD51AP2Q09MP3 1159 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 NFIL3Q16649 462 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 MAN2A1Q16706 1144 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 UGCGQ16739 394 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 CCSAPQ6IQ19 270 aaPredicted RBP10.37□□□□□ -0.75
VPS25-205ENST00000590339 TAPT1Q6NXT6 567 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 PPFIBP1Q86W92 1011 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 CNGA4Q8IV77 575 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 DAW1Q8N136 415 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 BADQ92934 168 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 LRCH3Q96II8 777 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 CDHR1Q96JP9 859 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 GLT1D1Q96MS3 346 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 TSEN34Q9BSV6 310 aaKnown RBP10.37□□□□□ -0.75
VPS25-205ENST00000590339 AP5M1Q9H0R1 490 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 PKD2L1Q9P0L9 805 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 TBC1D7Q9P0N9 293 aa10.37□□□□□ -0.75
VPS25-205ENST00000590339 PLXNA1Q9UIW2 1896 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 ARHGEF35A5YM69 484 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 TRIM43BA6NCK2 446 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 B4DLN1 442 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 SPATA31C2B4DYI2 1134 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 PDXKO00764 312 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 ZBTB39O15060 712 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 PPP1R37O75864 691 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 FAM13AO94988 1023 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 TPM2P07951 284 aa10.36□□□□□ -0.75
VPS25-205ENST00000590339 MYBP10242 640 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms