RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 IGKV6D-41A0A0C4DH26 115 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 TREHO43280 583 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 PFKFB2O60825 505 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 CDKL5O76039 1030 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 ZNF286BP0CG31 522 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 CCT2P78371 535 aaKnown RBP13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 ARHGAP1Q07960 439 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 RTN1Q16799 776 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 CCDC83Q8IWF9 413 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 NEUROG3Q9Y4Z2 214 aa13.2□□□□□ -0.3
CAPNS1-209ENST00000590049 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 KANSL1LA0AUZ9 987 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 C17orf102A2RUQ5 167 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 J3QKU1 62 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 NTRK1P04629 796 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 GNAQP50148 359 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 KANK3Q6NY19 840 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 NXPE3Q969Y0 559 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 SYNPO2Q9UMS6 1093 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
CAPNS1-209ENST00000590049 GREB1LQ9C091 1923 aaPredicted RBP13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 GIPC1O14908 333 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 C1QL1O75973 258 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 LARGE1O95461 756 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 RXRAP19793 462 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 SCRN1Q12765 414 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 TROAPQ12815 778 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 SIM2Q14190 667 aaPredicted RBP13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 FANCBQ8NB91 859 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 SPRYD3Q8NCJ5 442 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 MKL1Q969V6 931 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 MAP3K14Q99558 947 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
CAPNS1-209ENST00000590049 ASXL3Q9C0F0 2248 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 MYH4Q9Y623 1939 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 GHRP10912 638 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 EDNRBP24530 442 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 NOVP48745 357 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 SRSF1Q07955 248 aaKnown RBP eCLIP13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 CUL4AQ13619 759 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 UBXN2BQ14CS0 331 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 SF3A2Q15428 464 aaKnown RBP13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 FAM184AQ8NB25 1140 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 KLHL5Q96PQ7 755 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 SLC2A4RGQ9NR83 387 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
CAPNS1-209ENST00000590049 FAM170BA6NMN3 283 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 TK2O00142 265 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 SLC1A4P43007 532 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 GRM4Q14833 912 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 COLGALT1Q8NBJ5 622 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 LRIG1Q96JA1 1093 aa13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
CAPNS1-209ENST00000590049 CFAP46Q8IYW2 2715 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 B4DLN1 442 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 PDHBP11177 359 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 HOXC8P31273 242 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 GATMP50440 423 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 STAT2P52630 851 aa13.15□□□□□ -0.3
CAPNS1-209ENST00000590049 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms