RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZKSCAN5Q9Y2L8 839 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 ITIH6Q6UXX5 1313 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 CETN3O15182 167 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 TGFB1I1O43294 461 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 GNA14O95837 355 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 LGALS2P05162 132 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 SMPD1P17405 629 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 CYP2B6P20813 491 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 NR2F2P24468 414 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 CTGFP29279 349 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 FCGRTP55899 365 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 MARSP56192 900 aaKnown RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 PEX3P56589 373 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 ADAM9Q13443 819 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 PLCB4Q15147 1175 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 NFIL3Q16649 462 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 IQSEC1Q6DN90 963 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 ZNF784Q8NCA9 323 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 CCDC150Q8NCX0 1101 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 SLC7A3Q8WY07 619 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 BSNDQ8WZ55 320 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 POLR3FQ9H1D9 316 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 SMARCAD1Q9H4L7 1026 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 THSD7BQ9C0I4 1608 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 SIP14410 1827 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 IGHA2P01877 340 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 NR3C1P04150 777 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 RPL13P26373 211 aaKnown RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 MARK3P27448 753 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 NPTX2P47972 431 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 SMTNP53814 917 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 SOX10P56693 466 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 GTF2BQ00403 316 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 UBXN1Q04323 297 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 TBX2Q13207 712 aaPredicted RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 CCL14Q16627 93 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 MAN2A1Q16706 1144 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 HAUS6Q7Z4H7 955 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 KSR1Q8IVT5 923 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 OR6J1Q8NGC5 347 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 GOLGA5Q8TBA6 731 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 AFG1LQ8WV93 481 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 ZNF830Q96NB3 372 aaPredicted RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 TMEM206Q9H813 350 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
SMAD4-205ENST00000588745 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
SMAD4-205ENST00000588745 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 ESPNB1AK53 854 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 PES1O00541 588 aaKnown RBP12.54□□□□□ -0.4
SMAD4-205ENST00000588745 SLC16A4O15374 487 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 ADCY6O43306 1168 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 MAFO75444 373 aaPredicted RBP12.54□□□□□ -0.4
SMAD4-205ENST00000588745 ZNF865P0CJ78 1059 aaPredicted RBP12.54□□□□□ -0.4
SMAD4-205ENST00000588745 HOXD8P13378 290 aaPredicted RBP12.54□□□□□ -0.4
SMAD4-205ENST00000588745 YY1P25490 414 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 DNM2P50570 870 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
SMAD4-205ENST00000588745 TNFAIP2Q03169 654 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 MAP4K3Q8IVH8 894 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 LRRC8AQ8IWT6 810 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 TMEM161BQ8NDZ6 487 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
SMAD4-205ENST00000588745 AGPAT3Q9NRZ7 376 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 CASP8AP2Q9UKL3 1982 aa12.54□□□□□ -0.4
SMAD4-205ENST00000588745 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ZBTB42B2RXF5 422 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 H0YCG3 227 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 CLIC2O15247 247 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 GAS2O43903 313 aaKnown RBP12.53□□□□□ -0.4
SMAD4-205ENST00000588745 HBP1O60381 514 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 MMP3P08254 477 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMAD4-205ENST00000588745 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
SMAD4-205ENST00000588745 CYP2C19P33261 490 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ABCD1P33897 745 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ARL2P36404 184 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 PSMC4P43686 418 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 LRMPQ12912 555 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 TRIM14Q14142 442 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 PPP2R5AQ15172 486 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ARMCX5Q6P1M9 558 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms