RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 BTG3Q14201 252 aaPredicted RBP21.32■■□□□ 1
TPM4-204ENST00000586499 NBR1Q14596 966 aa21.32■■□□□ 1
TPM4-204ENST00000586499 ODR4Q5SWX8 454 aa21.32■■□□□ 1
TPM4-204ENST00000586499 RHPN2Q8IUC4 686 aa21.32■■□□□ 1
TPM4-204ENST00000586499 HSD17B14Q9BPX1 270 aa21.32■■□□□ 1
TPM4-204ENST00000586499 RGS18Q9NS28 235 aa21.32■■□□□ 1
TPM4-204ENST00000586499 POTEMA6NI47 508 aa21.31■■□□□ 1
TPM4-204ENST00000586499 DARSP14868 501 aaKnown RBP21.31■■□□□ 1
TPM4-204ENST00000586499 SARSP49591 514 aaKnown RBP21.31■■□□□ 1
TPM4-204ENST00000586499 DSC3Q14574 896 aa21.31■■□□□ 1
TPM4-204ENST00000586499 PAN2Q504Q3 1202 aaKnown RBP21.31■■□□□ 1
TPM4-204ENST00000586499 TTC38Q5R3I4 469 aa21.31■■□□□ 1
TPM4-204ENST00000586499 LRFN2Q9ULH4 789 aa21.31■■□□□ 1
TPM4-204ENST00000586499 VCANP13611 3396 aa21.3■■□□□ 1
TPM4-204ENST00000586499 A0A087WZ62 844 aa21.3■■□□□ 1
TPM4-204ENST00000586499 C9IYK1 514 aa21.3■■□□□ 1
TPM4-204ENST00000586499 STAG3L1P0CL83 205 aa21.3■■□□□ 1
TPM4-204ENST00000586499 SKIV2LQ15477 1246 aaKnown RBP21.3■■□□□ 1
TPM4-204ENST00000586499 XKR9Q5GH70 373 aa21.3■■□□□ 1
TPM4-204ENST00000586499 FAM102BQ5T8I3 360 aa21.3■■□□□ 1
TPM4-204ENST00000586499 SLC24A5Q71RS6 500 aa21.3■■□□□ 1
TPM4-204ENST00000586499 OTUD6AQ7L8S5 288 aa21.3■■□□□ 1
TPM4-204ENST00000586499 ZNF710Q8N1W2 664 aa21.3■■□□□ 1
TPM4-204ENST00000586499 TMEM143Q96AN5 459 aa21.3■■□□□ 1
TPM4-204ENST00000586499 SAMD11Q96NU1 681 aa21.3■■□□□ 1
TPM4-204ENST00000586499 FDXACB1Q9BRP7 624 aaPredicted RBP21.3■■□□□ 1
TPM4-204ENST00000586499 BACH2Q9BYV9 841 aa21.3■■□□□ 1
TPM4-204ENST00000586499 DHX33Q9H6R0 707 aaKnown RBP21.3■■□□□ 1
TPM4-204ENST00000586499 PCDHB7Q9Y5E2 793 aa21.3■■□□□ 1
TPM4-204ENST00000586499 XIRP2A4UGR9 3374 aa21.29■■□□□ 1
TPM4-204ENST00000586499 NLRC5Q86WI3 1866 aa21.29■■□□□ 1
TPM4-204ENST00000586499 DLL1O00548 723 aa21.29■■□□□ 1
TPM4-204ENST00000586499 U2AF2P26368 475 aaKnown RBP eCLIP21.29■■□□□ 13e-8■□□□□ 9.8
TPM4-204ENST00000586499 GJB2P29033 226 aa21.29■■□□□ 1
TPM4-204ENST00000586499 CTNNB1P35222 781 aa21.29■■□□□ 1
TPM4-204ENST00000586499 TECP42680 631 aa21.29■■□□□ 1
TPM4-204ENST00000586499 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
TPM4-204ENST00000586499 POLGP54098 1239 aaPredicted RBP21.29■■□□□ 1
TPM4-204ENST00000586499 GPM6BQ13491 265 aa21.29■■□□□ 1
TPM4-204ENST00000586499 SLC7A3Q8WY07 619 aa21.29■■□□□ 1
TPM4-204ENST00000586499 NLRP4Q96MN2 994 aa21.29■■□□□ 1
TPM4-204ENST00000586499 GCOM2Q9BZD3 368 aaPredicted RBP21.29■■□□□ 1
TPM4-204ENST00000586499 C1orf112Q9NSG2 853 aa21.29■■□□□ 1
TPM4-204ENST00000586499 MRPL42Q9Y6G3 142 aaKnown RBP21.29■■□□□ 1
TPM4-204ENST00000586499 H3BNC9 293 aa21.28■■□□□ 1
TPM4-204ENST00000586499 OR52Z1P0C646 297 aa21.28■■□□□ 1
TPM4-204ENST00000586499 BMPR1AP36894 532 aa21.28■■□□□ 1
TPM4-204ENST00000586499 MCM2P49736 904 aa21.28■■□□□ 1
TPM4-204ENST00000586499 FAM189BP81408 668 aa21.28■■□□□ 1
TPM4-204ENST00000586499 C4orf32Q8N8J7 132 aa21.28■■□□□ 1
TPM4-204ENST00000586499 IL27Q8NEV9 243 aa21.28■■□□□ 1
TPM4-204ENST00000586499 PIGOQ8TEQ8 1089 aa21.28■■□□□ 1
TPM4-204ENST00000586499 PRPF31Q8WWY3 499 aaKnown RBP21.28■■□□□ 1
TPM4-204ENST00000586499 CLP1Q92989 425 aaKnown RBP21.28■■□□□ 1
TPM4-204ENST00000586499 JPH2Q9BR39 696 aaPredicted RBP21.28■■□□□ 1
TPM4-204ENST00000586499 LMCD1Q9NZU5 365 aa21.28■■□□□ 1
TPM4-204ENST00000586499 LYPLA2O95372 231 aa21.27■■□□□ 1
TPM4-204ENST00000586499 SPATA31C1P0DKV0 1188 aa21.27■■□□□ 1
TPM4-204ENST00000586499 ZSCAN20P17040 1043 aaPredicted RBP21.27■■□□□ 1
TPM4-204ENST00000586499 RFC5P40937 340 aa21.27■■□□□ 1
TPM4-204ENST00000586499 CDC42EP1Q00587 391 aa21.27■■□□□ 1
TPM4-204ENST00000586499 CMTR2Q8IYT2 770 aaKnown RBP21.27■■□□□ 1
TPM4-204ENST00000586499 COL25A1Q9BXS0 654 aaPredicted RBP21.27■■□□□ 1
TPM4-204ENST00000586499 THEGQ9P2T0 379 aa21.27■■□□□ 1
TPM4-204ENST00000586499 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
TPM4-204ENST00000586499 COL4A3BPQ9Y5P4 624 aa21.27■■□□□ 1
TPM4-204ENST00000586499 SPTBN5Q9NRC6 3674 aaKnown RBP21.27■■□□□ 1
TPM4-204ENST00000586499 MED24O75448 989 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 SRGAP2CP0DJJ0 459 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 FGFR1P11362 822 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 TRAPPC10P48553 1259 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 TFF2Q03403 129 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 EMC2Q15006 297 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 MCTP1Q6DN14 999 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 NEK9Q8TD19 979 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 IFT122Q9HBG6 1241 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 XPNPEP1Q9NQW7 623 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 TMEM161AQ9NX61 479 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 KIF3AQ9Y496 699 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 PPME1Q9Y570 386 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 PCDHB6Q9Y5E3 794 aa21.26■□□□□ 0.99
TPM4-204ENST00000586499 ARID2Q68CP9 1835 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 TBKBP1A7MCY6 615 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 C5orf67F2Z3F1 127 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 LAMTOR4Q0VGL1 99 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 ORC2Q13416 577 aaPredicted RBP21.25■□□□□ 0.99
TPM4-204ENST00000586499 RALGAPA2Q2PPJ7 1873 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 FAM43BQ6ZT52 329 aaPredicted RBP21.25■□□□□ 0.99
TPM4-204ENST00000586499 ZNF410Q86VK4 478 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 CATSPER3Q86XQ3 398 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 EXOC8Q8IYI6 725 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 PSPC1Q8WXF1 523 aaKnown RBP21.25■□□□□ 0.99
TPM4-204ENST00000586499 MRPL38Q96DV4 380 aaKnown RBP21.25■□□□□ 0.99
TPM4-204ENST00000586499 ATP6V0A4Q9HBG4 840 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 ANKEF1Q9NU02 776 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 HCSTQ9UBK5 93 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 SMC3Q9UQE7 1217 aa21.25■□□□□ 0.99
TPM4-204ENST00000586499 GRM6O15303 877 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 RB1P06400 928 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 RARRES1P49788 294 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms