RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CYP26B1Q9NR63 512 aa24.05■■□□□ 1.44
PPP4R1-228ENST00000584074 SH2B1Q9NRF2 756 aaPredicted RBP24.05■■□□□ 1.44
PPP4R1-228ENST00000584074 COG5Q9UP83 839 aa24.05■■□□□ 1.44
PPP4R1-228ENST00000584074 RWDD3Q9Y3V2 267 aa24.05■■□□□ 1.44
PPP4R1-228ENST00000584074 NEMFO60524 1076 aa24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 DKC1O60832 514 aaKnown RBP eCLIP24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 CSDE1O75534 798 aaKnown RBP24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 FGFR4P22455 802 aa24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 DNM2P50570 870 aa24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 SAFBQ15424 915 aaKnown RBP eCLIP24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 DYDC2Q96IM9 177 aa24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 C11orf84Q9BUA3 381 aaPredicted RBP24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 SUCLA2Q9P2R7 463 aaPredicted RBP24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 PCDHA12Q9UN75 941 aa24.04■■□□□ 1.44
PPP4R1-228ENST00000584074 GRM6O15303 877 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 ATP2B1P20020 1258 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 KCNQ1P51787 676 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 FAM189BP81408 668 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 CYP4A11Q02928 519 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 CTTNQ14247 550 aaKnown RBP24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 AAK1Q2M2I8 961 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 FAM102BQ5T8I3 360 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 C4orf19Q8IY42 314 aa24.03■■□□□ 1.44
PPP4R1-228ENST00000584074 MUC3AQ02505 3323 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 ZBTB39O15060 712 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 HMGN5P82970 282 aaKnown RBP24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 RHPN2Q8IUC4 686 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 KSR1Q8IVT5 923 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 IL27Q8NEV9 243 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 ADAMTS19Q8TE59 1207 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 CEP170P1Q96L14 293 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 MTMR9Q96QG7 549 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 ZSWIM4Q9H7M6 989 aa24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 TTC12Q9H892 705 aaPredicted RBP24.02■■□□□ 1.44
PPP4R1-228ENST00000584074 A0A087WZ62 844 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 SLITRK3O94933 977 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 BMP1P13497 986 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 YWHABP31946 246 aaKnown RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 TXKP42681 527 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 CDC42EP1Q00587 391 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 RABEP1Q15276 862 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 TPH2Q8IWU9 490 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 FBXO18Q8NFZ0 1043 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 SLC7A3Q8WY07 619 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 EIF2AK1Q9BQI3 630 aaKnown RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 JPH2Q9BR39 696 aaPredicted RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 FDXACB1Q9BRP7 624 aaPredicted RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 PLVAPQ9BX97 442 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 GCOM2Q9BZD3 368 aaPredicted RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 TMEM60Q9H2L4 133 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 ATP6V0A4Q9HBG4 840 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 ALG13Q9NP73 1137 aaKnown RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 RNF216Q9NWF9 866 aaPredicted RBP24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 TMEM161AQ9NX61 479 aa24.01■■□□□ 1.43
PPP4R1-228ENST00000584074 NLRC5Q86WI3 1866 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 TBKBP1A7MCY6 615 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 FGFR1P11362 822 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 ZSCAN20P17040 1043 aaPredicted RBP24■■□□□ 1.43
PPP4R1-228ENST00000584074 MCM7P33993 719 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 POLGP54098 1239 aaPredicted RBP24■■□□□ 1.43
PPP4R1-228ENST00000584074 TIGD5Q53EQ6 642 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 FAM184AQ8NB25 1140 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 DHX33Q9H6R0 707 aaKnown RBP24■■□□□ 1.43
PPP4R1-228ENST00000584074 ELAC1Q9H777 363 aaKnown RBP24■■□□□ 1.43
PPP4R1-228ENST00000584074 BMP2KQ9NSY1 1161 aaPredicted RBP24■■□□□ 1.43
PPP4R1-228ENST00000584074 RALGAPA2Q2PPJ7 1873 aa24■■□□□ 1.43
PPP4R1-228ENST00000584074 XKR9Q5GH70 373 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 TCEAL5Q5H9L2 206 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 OTUD6AQ7L8S5 288 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 TMEM143Q96AN5 459 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 NLRP4Q96MN2 994 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 HSD17B14Q9BPX1 270 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 FOXP1Q9H334 677 aaPredicted RBP23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 PLAGL2Q9UPG8 496 aa23.99■■□□□ 1.43
PPP4R1-228ENST00000584074 TTC28Q96AY4 2481 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 CSPG5O95196 566 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 ZNF410Q86VK4 478 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 KLHL23Q8NBE8 558 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 PRPF31Q8WWY3 499 aaKnown RBP23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 P2RX5Q93086 422 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 LMAN2LQ9H0V9 348 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 NSUN3Q9H649 340 aaKnown RBP23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 UBE2ZQ9H832 354 aaPredicted RBP23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 HCSTQ9UBK5 93 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 PPME1Q9Y570 386 aa23.98■■□□□ 1.43
PPP4R1-228ENST00000584074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 ITGB1P05556 798 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 RFC5P40937 340 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 CAMK1Q14012 370 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 ECHDC2Q86YB7 292 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 EXOC8Q8IYI6 725 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 RNF169Q8NCN4 708 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 NECAB3Q96P71 396 aaPredicted RBP23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 UHRF1Q96T88 793 aaPredicted RBP23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 RNF19AQ9NV58 838 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 COL4A3BPQ9Y5P4 624 aa23.97■■□□□ 1.43
PPP4R1-228ENST00000584074 POTEMA6NI47 508 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 ST18O60284 1047 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 SFPQP23246 707 aaKnown RBP eCLIP23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 DNAJB1P25685 340 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms