RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 NBR1Q14596 966 aa11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 OTUD6AQ7L8S5 288 aa11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 JPH2Q9BR39 696 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 DHX33Q9H6R0 707 aaKnown RBP11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 RGS18Q9NS28 235 aa11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 SUCLA2Q9P2R7 463 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 PCDHB6Q9Y5E3 794 aa11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 COL4A4P53420 1690 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-220ENST00000581835 A0A087WZ62 844 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 DENND3A2RUS2 1198 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 H3BQV1 296 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 LPXNO60711 386 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 DGKIO75912 1065 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 SPATA31C1P0DKV0 1188 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 DARSP14868 501 aaKnown RBP11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 RFC5P40937 340 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 POLGP54098 1239 aaPredicted RBP11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 GRB10Q13322 594 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 DSC3Q14574 896 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 XKR9Q5GH70 373 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 MCTP1Q6DN14 999 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 NPAS4Q8IUM7 802 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 EXOC8Q8IYI6 725 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 SLC7A3Q8WY07 619 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 ADAM2Q99965 735 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 FDXACB1Q9BRP7 624 aaPredicted RBP11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 C1orf112Q9NSG2 853 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 MTUS1Q9ULD2 1270 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
PPP4R1-220ENST00000581835 KIAA1671Q9BY89 1806 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 NCOR1O75376 2440 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 ADGRA3Q8IWK6 1321 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 C9IYK1 514 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 MED24O75448 989 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 STAG3L1P0CL83 205 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 XRCC6P12956 609 aaKnown RBP eCLIP11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 FGFR4P22455 802 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 RARRES1P49788 294 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 PTGDRQ13258 359 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 RILPL1Q5EBL4 403 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 LARP1BQ659C4 914 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 SLC24A5Q71RS6 500 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 ZNF410Q86VK4 478 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 CATSPER3Q86XQ3 398 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 FIBCD1Q8N539 461 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 GDPD5Q8WTR4 605 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 PPM1EQ8WY54 764 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 TMEM143Q96AN5 459 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 SCLT1Q96NL6 688 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 SAMD11Q96NU1 681 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 POLR3CQ9BUI4 534 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 TUFT1Q9NNX1 390 aa11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-220ENST00000581835 LAD1O00515 517 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 ASAP2O43150 1006 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 GAS2O43903 313 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 CSDE1O75534 798 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 LINC00271P0C7V0 271 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 ZSCAN20P17040 1043 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 RPA1P27694 616 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 FAM189BP81408 668 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 PDIA5Q14554 519 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 EMC2Q15006 297 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 CCDC85BQ15834 202 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 EPC2Q52LR7 807 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 TMEM192Q8IY95 271 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 FBXO22Q8NEZ5 403 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 ERMNQ8TAM6 284 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 PIGOQ8TEQ8 1089 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 TCP11Q8WWU5 503 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 PRPF31Q8WWY3 499 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 PSPC1Q8WXF1 523 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 NLRP4Q96MN2 994 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 MTRQ99707 1265 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 INO80BQ9C086 356 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 IFT122Q9HBG6 1241 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 XPNPEP1Q9NQW7 623 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 LMCD1Q9NZU5 365 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 XIRP2A4UGR9 3374 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 TTC28Q96AY4 2481 aa11.45□□□□□ -0.58
PPP4R1-220ENST00000581835 A0A087WWV3 80 aa11.44□□□□□ -0.58
PPP4R1-220ENST00000581835 DGAT1O75907 488 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1295.1 ms