RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 CTCFLQ8NI51 663 aaPredicted RBP9.03□□□□□ -0.96
SRSF1-203ENST00000581497 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
SRSF1-203ENST00000581497 LZTS2Q9BRK4 669 aa9.03□□□□□ -0.96
SRSF1-203ENST00000581497 KATNAL1Q9BW62 490 aa9.03□□□□□ -0.96
SRSF1-203ENST00000581497 DNAJB12Q9NXW2 375 aaKnown RBP9.03□□□□□ -0.96
SRSF1-203ENST00000581497 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
SRSF1-203ENST00000581497 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
SRSF1-203ENST00000581497 KIAA1024Q9UPX6 916 aa9.03□□□□□ -0.96
SRSF1-203ENST00000581497 SLC4A7Q9Y6M7 1214 aa9.03□□□□□ -0.96
SRSF1-203ENST00000581497 LCTP09848 1927 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 CCDC69A6NI79 296 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 GRXCR1A8MXD5 290 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 PRC1O43663 620 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 ACTN1P12814 892 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 SMARCA1P28370 1054 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 MCM6Q14566 821 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 PTGISQ16647 500 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 NFXL1Q6ZNB6 911 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 DEFB128Q7Z7B8 93 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 CAGE1Q8TC20 777 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 KAT2BQ92831 832 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
SRSF1-203ENST00000581497 SPZ1Q9BXG8 430 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 KRTAP9-9Q9BYP9 154 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 KRTAP9-4Q9BYQ2 154 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 LSG1Q9H089 658 aaKnown RBP9.02□□□□□ -0.97
SRSF1-203ENST00000581497 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 LY9Q9HBG7 655 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 GOLGA2P5Q9HBQ8 144 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 SEC63Q9UGP8 760 aaKnown RBP9.02□□□□□ -0.97
SRSF1-203ENST00000581497 RNF112Q9ULX5 631 aa9.02□□□□□ -0.97
SRSF1-203ENST00000581497 SLC27A2O14975 620 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 PPFIA4O75335 1185 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 STAM2O75886 525 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 RGS9O75916 674 aaPredicted RBP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 PARNO95453 639 aaKnown RBP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 GGPS1O95749 300 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 IQCF3P0C7M6 154 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CALM1P0DP23 149 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CALM2P0DP24 149 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CALM3P0DP25 149 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 HOXD8P13378 290 aaPredicted RBP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 ATP2A2P16615 1042 aaKnown RBP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 LIFRP42702 1097 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 ATP1A2P50993 1020 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 GNPTABQ3T906 1256 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CELF3Q5SZQ8 465 aaKnown RBP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CREB3L3Q68CJ9 461 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CENPQQ7L2Z9 268 aaPredicted RBP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 C7orf31Q8N865 590 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 AFAP1L1Q8TED9 768 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 PPP1R13LQ8WUF5 828 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 PIBF1Q8WXW3 757 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 CUL5Q93034 780 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 VWCEQ96DN2 955 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 SPATA33Q96N06 139 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 MYL10Q9BUA6 226 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
SRSF1-203ENST00000581497 ANO2Q9NQ90 1003 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 GTF2IRD1Q9UHL9 959 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 PCDHA11Q9Y5I1 949 aa9.01□□□□□ -0.97
SRSF1-203ENST00000581497 HAS3O00219 553 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 SH2B2O14492 632 aaPredicted RBP9□□□□□ -0.97
SRSF1-203ENST00000581497 F2P00734 622 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 UBA1P22314 1058 aaKnown RBP9□□□□□ -0.97
SRSF1-203ENST00000581497 NECTIN1Q15223 517 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 HIF1AQ16665 826 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 KIAA0753Q2KHM9 967 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 GDF6Q6KF10 455 aaPredicted RBP9□□□□□ -0.97
SRSF1-203ENST00000581497 IL31RAQ8NI17 732 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 SMARCC2Q8TAQ2 1214 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 PHOSPHO2Q8TCD6 241 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 WFDC12Q8WWY7 111 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 INPP4AQ96PE3 977 aaPredicted RBP9□□□□□ -0.97
SRSF1-203ENST00000581497 PNMA5Q96PV4 448 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 ALG1Q9BT22 464 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 NKX2-4Q9H2Z4 354 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 PRDM12Q9H4Q4 367 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 MLXIPQ9HAP2 919 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 YBX2Q9Y2T7 364 aaKnown RBP9□□□□□ -0.97
SRSF1-203ENST00000581497 SLC12A7Q9Y666 1083 aa9□□□□□ -0.97
SRSF1-203ENST00000581497 KIF28PB7ZC32 967 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 M0R2N6 131 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 NOP56O00567 594 aaKnown RBP8.99□□□□□ -0.97
SRSF1-203ENST00000581497 FIBPO43427 364 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 BAIAP3O94812 1187 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 ICAM3P32942 547 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 RABGGTBP53611 331 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 CLDN10P78369 228 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 SP2Q02086 613 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 RBL2Q08999 1139 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 PTK7Q13308 1070 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 NEDD9Q14511 834 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 HSDL1Q3SXM5 330 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
SRSF1-203ENST00000581497 SYNE3Q6ZMZ3 975 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms