RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MRPL46Q9H2W6 279 aaKnown RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 SEPT9Q9UHD8 586 aaPredicted RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 FAM107AO95990 144 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 ATP1A1P05023 1023 aaKnown RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 PSAPP07602 524 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 PAPOLAP51003 745 aaKnown RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 STAT2P52630 851 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 KLC1Q07866 573 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 ARL13BQ3SXY8 428 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 TRIM59Q8IWR1 403 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 CSADQ9Y600 493 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 UBN2Q6ZU65 1347 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 PNPLA7Q6ZV29 1317 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 SLC16A3O15427 465 aaKnown RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 RIBC1Q8N443 379 aaPredicted RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 ATP6V1E2Q96A05 226 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 BTBD6Q96KE9 485 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 ASNSD1Q9NWL6 643 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 PDXKO00764 312 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 COASYQ13057 564 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 ZBTB18Q99592 522 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 USP15Q9Y4E8 981 aaPredicted RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 KIAA0391O15091 583 aaKnown RBP11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ORC4O43929 436 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 GRM4Q14833 912 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ICA1LQ8NDH6 482 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 FBXL13Q8NEE6 735 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ZNF564Q8TBZ8 553 aaPredicted RBP11.46□□□□□ -0.58
SEC22B-201ENST00000578049 OSBPL1AQ9BXW6 950 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 UVRAGQ9P2Y5 699 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ATP8B3O60423 1300 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 PITPNM2Q9BZ72 1349 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 H0Y3Z8 333 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ARHGDIAP52565 204 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 AP3M2P53677 418 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ITKQ08881 620 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 NR1I3Q14994 352 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 WDR93Q6P2C0 686 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ZFYVE16Q7Z3T8 1539 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 METTL16Q86W50 562 aaKnown RBP11.46□□□□□ -0.58
SEC22B-201ENST00000578049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.46□□□□□ -0.58
SEC22B-201ENST00000578049 IP6K2Q9UHH9 426 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 ARHGAP26Q9UNA1 814 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 SNX5Q9Y5X3 404 aa11.46□□□□□ -0.58
SEC22B-201ENST00000578049 NCOA3Q9Y6Q9 1424 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 PLEKHA8P1O95397 391 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 SMARCA1P28370 1054 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 MCAMP43121 646 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 OCRLQ01968 901 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 GFPT1Q06210 699 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 GOLGA8MH3BSY2 632 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 PSMA2P25787 234 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 OR6B2Q6IFH4 312 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 DACT3Q96B18 629 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 FAF2Q96CS3 445 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 SNX25Q9H3E2 840 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 TBC1D22BQ9NU19 505 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 HPCAL4Q9UM19 191 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 PLA2R1Q13018 1463 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ZBTB5O15062 677 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ACTN3Q08043 901 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 TRIP13Q15645 432 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ADSSL1Q8N142 457 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 MCUQ8NE86 351 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 SYN2Q92777 582 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ANKRD27Q96NW4 1050 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 CXorf56Q9H5V9 222 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 LRRC4Q9HBW1 653 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 WDR64B1ANS9 1081 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ITIH2P19823 946 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 KIAA1755Q5JYT7 1200 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 SLC30A9Q6PML9 568 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ATL2Q8NHH9 583 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 COA7Q96BR5 231 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 FBXO2Q9UK22 296 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 PBRM1Q86U86 1689 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 CFLARO15519 480 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 IRAK1P51617 712 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 TMEM179Q6ZVK1 233 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 TAB3Q8N5C8 712 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 CEP70Q8NHQ1 597 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 POLR3CQ9BUI4 534 aaPredicted RBP11.45□□□□□ -0.58
SEC22B-201ENST00000578049 BARHL2Q9NY43 387 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 PLEKHG2Q9H7P9 1386 aa11.45□□□□□ -0.58
SEC22B-201ENST00000578049 ANKRD65E5RJM6 399 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 MAN1A2O60476 641 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 SPAG6O75602 509 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms