RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 GDF10P55107 478 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 FAM47CQ5HY64 1035 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 LRCH2Q5VUJ6 765 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 NFRKBQ6P4R8 1299 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 C4orf32Q8N8J7 132 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 TOX2Q96NM4 488 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 WNT8AQ9H1J5 351 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 ETNK1Q9HBU6 452 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 BRMS1Q9HCU9 246 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 PRDM5Q9NQX1 630 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 GTF2IRD1Q9UHL9 959 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 EMSYQ7Z589 1322 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SFI1A8K8P3 1242 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 KIAA0355O15063 1070 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 ZNF862O60290 1169 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SMIM10L2AP0DMW4 78 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SMIM10L2BP0DMW5 78 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SYT1P21579 422 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 EPHB4P54760 987 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SEC13P55735 322 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 ADAM17P78536 824 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 RELBQ01201 579 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 PLCB4Q15147 1175 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 ZNF174Q15697 407 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 BRDTQ58F21 947 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 MARCH8Q5T0T0 291 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 FAM173BQ6P4H8 233 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 FERMT3Q86UX7 667 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SESTD1Q86VW0 696 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 INTS4Q96HW7 963 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 MTMR9Q96QG7 549 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 RIT2Q99578 217 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 GDF15Q99988 308 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 TBC1D22BQ9NU19 505 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 SETD4Q9NVD3 440 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 WRAP73Q9P2S5 460 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
NPLOC4-219ENST00000576713 EYSQ5T1H1 3165 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 TMEM150BA6NC51 233 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 ZBTB42B2RXF5 422 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 TREHO43280 583 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 GAS7O60861 476 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 STBD1O95210 358 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 GCFC2P16383 781 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 CYP2C18P33260 490 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 MCM7P33993 719 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 MAGEA10P43363 369 aaPredicted RBP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 FXR1P51114 621 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 PKP1Q13835 747 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 SAFBQ15424 915 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 IL17AQ16552 155 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 TRIM71Q2Q1W2 868 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 MCTP1Q6DN14 999 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 ZNF746Q6NUN9 644 aaPredicted RBP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 RUFY4Q6ZNE9 571 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 LMBR1Q8WVP7 490 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 BADQ92934 168 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 NOC4LQ9BVI4 516 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 RAB6BQ9NRW1 208 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 ZNF358Q9NW07 568 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 MTMR6Q9Y217 621 aa10.67□□□□□ -0.7
NPLOC4-219ENST00000576713 IGSF9BQ9UPX0 1349 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 DCDC2CA8MYV0 355 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 NEMFO60524 1076 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 IL2RAP01589 272 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 BMP8BP34820 402 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 STAT5BP51692 787 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 KRT76Q01546 638 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 RESTQ13127 1097 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 GPNMBQ14956 572 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 PTGISQ16647 500 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 C16orf59Q7L2K0 433 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 TRMT1LQ7Z2T5 733 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 AFAP1L1Q8TED9 768 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 GLG1Q92896 1179 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 SCLYQ96I15 445 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 KATNAL1Q9BW62 490 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 TEKT3Q9BXF9 490 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms