RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
KARSP3-201ENST00000571212 TJP1Q07157 1748 aa6.33□□□□□ -1.4
KARSP3-201ENST00000571212 CCDC88AQ3V6T2 1871 aa6.33□□□□□ -1.4
KARSP3-201ENST00000571212 ADAMTS7Q9UKP4 1686 aa6.33□□□□□ -1.4
KARSP3-201ENST00000571212 VIRMAQ69YN4 1812 aaKnown RBP6.33□□□□□ -1.4
KARSP3-201ENST00000571212 USP42Q9H9J4 1324 aaKnown RBP6.32□□□□□ -1.4
KARSP3-201ENST00000571212 MYO1BO43795 1136 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 CPP00450 1065 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 TNNT2P45379 298 aaPredicted RBP6.32□□□□□ -1.4
KARSP3-201ENST00000571212 CRKLP46109 303 aaKnown RBP6.32□□□□□ -1.4
KARSP3-201ENST00000571212 MTHFSP49914 203 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 GJA9P57773 515 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 KCNAB2Q13303 367 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 RALBP1Q15311 655 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 CR1LQ2VPA4 569 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 JMYQ8N9B5 988 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 KYQ8NBH2 561 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 ARRDC4Q8NCT1 418 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 PRKRIP1Q9H875 184 aaPredicted RBP6.32□□□□□ -1.4
KARSP3-201ENST00000571212 AFDNP55196 1824 aaKnown RBP6.32□□□□□ -1.4
KARSP3-201ENST00000571212 KCPQ6ZWJ8 1503 aa6.32□□□□□ -1.4
KARSP3-201ENST00000571212 A0A1W2PQU0 124 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 TM4SF1P30408 202 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 LTBRP36941 435 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 ITGA1P56199 1179 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 PPP2R2AP63151 447 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 DDR1Q08345 913 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 LSAMPQ13449 338 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 C1orf141Q5JVX7 400 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 SLC35F1Q5T1Q4 408 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
KARSP3-201ENST00000571212 ERICH6BQ5W0A0 696 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 GGNQ86UU5 652 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 FAM126BQ8IXS8 530 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 POLR3GLQ9BT43 218 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 IGSF5Q9NSI5 407 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 RNF181Q9P0P0 153 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
KARSP3-201ENST00000571212 COA3Q9Y2R0 106 aaPredicted RBP6.31□□□□□ -1.4
KARSP3-201ENST00000571212 DLEC1Q9Y238 1755 aa6.31□□□□□ -1.4
KARSP3-201ENST00000571212 POLRMTO00411 1230 aaKnown RBP6.3□□□□□ -1.4
KARSP3-201ENST00000571212 RPL13P26373 211 aaKnown RBP6.3□□□□□ -1.4
KARSP3-201ENST00000571212 GTF2A2P52657 109 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 ANKS3Q6ZW76 656 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 EEPD1Q7L9B9 569 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
KARSP3-201ENST00000571212 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 JAG2Q9Y219 1238 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 NRXN2Q9P2S2 1712 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 DICER1Q9UPY3 1922 aaKnown RBP6.3□□□□□ -1.4
KARSP3-201ENST00000571212 DDX3XO00571 662 aaKnown RBP eCLIP6.3□□□□□ -1.4
KARSP3-201ENST00000571212 MSCO60682 206 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 PPP2R1AP30153 589 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 CHRNA5P30532 468 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 ADAM9Q13443 819 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 TESK1Q15569 626 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 STEAP3Q658P3 488 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 SMC1BQ8NDV3 1235 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 PPARGC1AQ9UBK2 798 aaKnown RBP6.3□□□□□ -1.4
KARSP3-201ENST00000571212 WASF3Q9UPY6 502 aa6.3□□□□□ -1.4
KARSP3-201ENST00000571212 SOS1Q07889 1333 aaPredicted RBP6.29□□□□□ -1.4
KARSP3-201ENST00000571212 H7BY64 318 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 HGSO14964 777 aaPredicted RBP6.29□□□□□ -1.4
KARSP3-201ENST00000571212 DLX3O60479 287 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 EFEMP1Q12805 493 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 SULT6B1Q6IMI4 303 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 DNAJC10Q8IXB1 793 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
KARSP3-201ENST00000571212 YIPF4Q9BSR8 244 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 JAM3Q9BX67 310 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 RBPJLQ9UBG7 517 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 NARFQ9UHQ1 456 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 R3HCC1Q9Y3T6 440 aaKnown RBP6.29□□□□□ -1.4
KARSP3-201ENST00000571212 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
KARSP3-201ENST00000571212 TIAM2Q8IVF5 1701 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 MRC1P22897 1456 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 GLTPD2A6NH11 291 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 TADA3O75528 432 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 CYP19A1P11511 503 aaPredicted RBP6.28□□□□□ -1.4
KARSP3-201ENST00000571212 VEGFAP15692 232 aaPredicted RBP6.28□□□□□ -1.4
KARSP3-201ENST00000571212 IL13P35225 146 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 NKX3-2P78367 333 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 DDR2Q16832 855 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 CC2D1BQ5T0F9 858 aaKnown RBP6.28□□□□□ -1.4
KARSP3-201ENST00000571212 HHIPL2Q6UWX4 724 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 USP53Q70EK8 1073 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
KARSP3-201ENST00000571212 COL3A1P02461 1466 aaPredicted RBP6.27□□□□□ -1.41
KARSP3-201ENST00000571212 COL15A1P39059 1388 aa6.27□□□□□ -1.41
KARSP3-201ENST00000571212 FER1L6Q2WGJ9 1857 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms