RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 RGL1Q9NZL6 768 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 PCDHB7Q9Y5E2 793 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 PLXNA4Q9HCM2 1894 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 C5orf42Q9H799 3197 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 ZBTB39O15060 712 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 P4HBP07237 508 aaKnown RBP16.44■□□□□ 0.22
FANCA-220ENST00000566409 FGFR4P22455 802 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 EPHA7Q15375 998 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 PTPROQ16827 1216 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 ODR4Q5SWX8 454 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
FANCA-220ENST00000566409 CYP26B1Q9NR63 512 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 LRFN2Q9ULH4 789 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
FANCA-220ENST00000566409 FGFR1P11362 822 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 DNAJB1P25685 340 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
FANCA-220ENST00000566409 AAK1Q2M2I8 961 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 TCEAL5Q5H9L2 206 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 KSR1Q8IVT5 923 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 SLFN12Q8IYM2 578 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 DYDC2Q96IM9 177 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 LLPHQ9BRT6 129 aaKnown RBP16.43■□□□□ 0.22
FANCA-220ENST00000566409 LXNQ9BS40 222 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 C11orf84Q9BUA3 381 aaPredicted RBP16.43■□□□□ 0.22
FANCA-220ENST00000566409 PLVAPQ9BX97 442 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 UBE2ZQ9H832 354 aaPredicted RBP16.43■□□□□ 0.22
FANCA-220ENST00000566409 RNF19AQ9NV58 838 aa16.43■□□□□ 0.22
FANCA-220ENST00000566409 A0A087WZ62 844 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 MARCH6O60337 910 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 SLITRK3O94933 977 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 ITGB1P05556 798 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 CYP4A11Q02928 519 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 CTTNQ14247 550 aaKnown RBP16.42■□□□□ 0.22
FANCA-220ENST00000566409 COL19A1Q14993 1142 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 P2RX5Q93086 422 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 MTMR9Q96QG7 549 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 UHRF1Q96T88 793 aaPredicted RBP16.42■□□□□ 0.22
FANCA-220ENST00000566409 HSD17B14Q9BPX1 270 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 FDXACB1Q9BRP7 624 aaPredicted RBP16.42■□□□□ 0.22
FANCA-220ENST00000566409 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 DHX33Q9H6R0 707 aaKnown RBP16.42■□□□□ 0.22
FANCA-220ENST00000566409 ELAC1Q9H777 363 aaKnown RBP16.42■□□□□ 0.22
FANCA-220ENST00000566409 TMEM161AQ9NX61 479 aa16.42■□□□□ 0.22
FANCA-220ENST00000566409 SUCLA2Q9P2R7 463 aaPredicted RBP16.42■□□□□ 0.22
FANCA-220ENST00000566409 TBKBP1A7MCY6 615 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 TNFRSF10AO00220 468 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
FANCA-220ENST00000566409 TRIM29Q14134 588 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 CALCRLQ16602 461 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 TIGD5Q53EQ6 642 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 RHPN2Q8IUC4 686 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 KLHL23Q8NBE8 558 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 SPPL3Q8TCT6 385 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 CEP170P1Q96L14 293 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 LMAN2LQ9H0V9 348 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
FANCA-220ENST00000566409 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
FANCA-220ENST00000566409 PCDHA12Q9UN75 941 aa16.41■□□□□ 0.22
FANCA-220ENST00000566409 NEMFO60524 1076 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 ATF7P17544 494 aaPredicted RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 KCNA5P22460 613 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 YWHABP31946 246 aaKnown RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 TXKP42681 527 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 DNM2P50570 870 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 CDC42EP1Q00587 391 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 ZNF598Q86UK7 904 aaKnown RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 ECHDC2Q86YB7 292 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 TMEM143Q96AN5 459 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 SCLT1Q96NL6 688 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 EIF2AK1Q9BQI3 630 aaKnown RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 GCOM2Q9BZD3 368 aaPredicted RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 CWH43Q9H720 699 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 IFT122Q9HBG6 1241 aa16.4■□□□□ 0.22
FANCA-220ENST00000566409 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
FANCA-220ENST00000566409 A0A0U1RQF3 1178 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 DKC1O60832 514 aaKnown RBP eCLIP16.39■□□□□ 0.21
FANCA-220ENST00000566409 CSPG5O95196 566 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 ZSCAN20P17040 1043 aaPredicted RBP16.39■□□□□ 0.21
FANCA-220ENST00000566409 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.218e-7■□□□□ 10.3
FANCA-220ENST00000566409 IRS1P35568 1242 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms