RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 A0A087WWV3 80 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 GAS2O43903 313 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 BRD1O95696 1058 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 TAP1Q03518 808 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 EMC2Q15006 297 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 HYIQ5T013 277 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 FOXD4L5Q5VV16 416 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 KRT79Q5XKE5 535 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 TMCO2Q7Z6W1 182 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 EXOC8Q8IYI6 725 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 FOXD4L4Q8WXT5 416 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 SEPT8Q92599 483 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 AK8Q96MA6 479 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 NACC1Q96RE7 527 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 OSMRQ99650 979 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
RABGGTA-219ENST00000560871 EVPLQ92817 2033 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 TLL1O43897 1013 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 DGAT1O75907 488 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 ARHGEF15O94989 841 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 CD52P31358 61 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 CRYBB1P53674 252 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 NLRP11P59045 1033 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 ZNF710Q8N1W2 664 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 LINC01599Q8WXQ3 324 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 PNMA5Q96PV4 448 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 MTRQ99707 1265 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 GINS2Q9Y248 185 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.36
RABGGTA-219ENST00000560871 GJB5O95377 273 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 LONP1P36776 959 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 FAM228AQ86W67 206 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 ZBED2Q9BTP6 218 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 ATP6V0A4Q9HBG4 840 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 ERVK-5Q9HDB9 667 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 SUCLA2Q9P2R7 463 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 KIAA1024Q9UPX6 916 aa17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 NOC2LQ9Y3T9 749 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 SRPRBQ9Y5M8 271 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-219ENST00000560871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 DLL1O00548 723 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 USO1O60763 962 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 IGFBP4P22692 258 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 DNM2P50570 870 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 PAK2Q13177 524 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 GRB10Q13322 594 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 KCNK18Q7Z418 384 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 CABP7Q86V35 215 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 ZNF410Q86VK4 478 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 ZNF668Q96K58 619 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 CCDC43Q96MW1 224 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 RAD9AQ99638 391 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 COL4A4P53420 1690 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-219ENST00000560871 LCHNA4D1U4 455 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 E9PMD0 336 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 RFXAPO00287 272 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 SLC26A4O43511 780 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 RPS6KA5O75582 802 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 YEATS4O95619 227 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 AMHP03971 560 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 DARSP14868 501 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 POU3F3P20264 500 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 EIF4BP23588 611 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 DDIT3P35638 169 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 ARL2P36404 184 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 RHPN2Q8IUC4 686 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 TCP11Q8WWU5 503 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 CSRNP2Q9H175 543 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 BHMT2Q9H2M3 363 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 CERS4Q9HA82 394 aa17.24■□□□□ 0.35
RABGGTA-219ENST00000560871 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 A0A087WZ62 844 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 EYA4O95677 639 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 KCTD17Q8N5Z5 321 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms