RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TCEAL8Q8IYN2 117 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 CALML6Q8TD86 181 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 ZNF526Q8TF50 670 aaPredicted RBP5.8□□□□□ -1.48
CASC4-206ENST00000558847 LMBR1Q8WVP7 490 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 TOE1Q96GM8 510 aaKnown RBP5.8□□□□□ -1.48
CASC4-206ENST00000558847 TMPRSS5Q9H3S3 457 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 TOPORSQ9NS56 1045 aaPredicted RBP5.8□□□□□ -1.48
CASC4-206ENST00000558847 MSRAQ9UJ68 235 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 ST20-MTHFSA0A0A6YYL1 179 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 UBA6A0AVT1 1052 aaPredicted RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 SH3D21A4FU49 640 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 KLHL33A6NCF5 533 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ZSCAN20P17040 1043 aaPredicted RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 ATF3P18847 181 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ENPP1P22413 925 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 PTX3P26022 381 aaPredicted RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 THBS2P35442 1172 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 TBX4P57082 545 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 SCAND1P57086 179 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ROM1Q03395 351 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 GRIN1Q05586 938 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ADAM9Q13443 819 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 SEC23AQ15436 765 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 FSCN1Q16658 493 aaKnown RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 TTC38Q5R3I4 469 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ZFYVE27Q5T4F4 411 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ESRP1Q6NXG1 681 aaKnown RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 RAVER1Q8IY67 606 aaKnown RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 HIPK4Q8NE63 616 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 RSAD2Q8WXG1 361 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 JPH3Q8WXH2 748 aaPredicted RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 ASB15Q8WXK1 588 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 RAX2Q96IS3 184 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 GBP4Q96PP9 640 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ORAI2Q96SN7 254 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 FOXB1Q99853 325 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 C11orf84Q9BUA3 381 aaPredicted RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 PCDH18Q9HCL0 1135 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 VTA1Q9NP79 307 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 SPATA6Q9NWH7 488 aaPredicted RBP5.79□□□□□ -1.48
CASC4-206ENST00000558847 RBPJLQ9UBG7 517 aa5.79□□□□□ -1.48
CASC4-206ENST00000558847 ACOT7O00154 380 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 CAND2O75155 1236 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 AOAHP28039 575 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 CNR2P34972 360 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 GJA9P57773 515 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 NKX3-2P78367 333 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 GFOD2Q3B7J2 385 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 EFCAB2Q5VUJ9 269 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 CXorf67Q86X51 503 aaPredicted RBP5.78□□□□□ -1.48
CASC4-206ENST00000558847 CPA6Q8N4T0 437 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 FERMT2Q96AC1 680 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 ARHGAP28Q9P2N2 729 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 IP6K2Q9UHH9 426 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 INVSQ9Y283 1065 aa5.78□□□□□ -1.48
CASC4-206ENST00000558847 GOLGA6L22H0YM25 854 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 XPOTO43592 962 aaKnown RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 MMEP08473 750 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 CYP2C19P33261 490 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 SLC5A3P53794 718 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 DBPQ10586 325 aaPredicted RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 SMAD4Q13485 552 aaKnown RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 GTF2H3Q13889 308 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 CLUL1Q15846 466 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 PRR31Q5SQ13 230 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 CARFQ8N187 725 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 MAGEB6Q8N7X4 407 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 KYQ8NBH2 561 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 WDR48Q8TAF3 677 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 RTF1Q92541 710 aaKnown RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 RPGRQ92834 1020 aaKnown RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 TSR2Q969E8 191 aaKnown RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 ZBTB8AQ96BR9 441 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 TUBGCP5Q96RT8 1024 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 RTFDC1Q9BY42 306 aaPredicted RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 RHOBTB2Q9BYZ6 727 aa5.77□□□□□ -1.49
CASC4-206ENST00000558847 CCM2LQ9NUG4 571 aaPredicted RBP5.77□□□□□ -1.49
CASC4-206ENST00000558847 CCDC194A0A1B0GVG4 234 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 FZD9O00144 591 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 PLIN1O60240 522 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 ENO2P09104 434 aaPredicted RBP5.76□□□□□ -1.49
CASC4-206ENST00000558847 GPR3P46089 330 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 MRPS9P82933 396 aaKnown RBP5.76□□□□□ -1.49
CASC4-206ENST00000558847 MLC1Q15049 377 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 UGT8Q16880 541 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 MINDY4Q4G0A6 757 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 CD276Q5ZPR3 534 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 KIAA1841Q6NSI8 718 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 TMC5Q6UXY8 1006 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 STK32CQ86UX6 486 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 CCDC146Q8IYE0 955 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 DTX3Q8N9I9 347 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 HSPBAP1Q96EW2 488 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 CSRNP2Q9H175 543 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 DNAJC28Q9NX36 388 aa5.76□□□□□ -1.49
CASC4-206ENST00000558847 RASSF10A6NK89 507 aa5.75□□□□□ -1.49
CASC4-206ENST00000558847 KRT18P05783 430 aaKnown RBP5.75□□□□□ -1.49
CASC4-206ENST00000558847 PF4V1P10720 104 aa5.75□□□□□ -1.49
CASC4-206ENST00000558847 PTGS1P23219 599 aa5.75□□□□□ -1.49
CASC4-206ENST00000558847 SARSP49591 514 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms