RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 PLXNA4Q9HCM2 1894 aa25.38■■□□□ 1.65
PABPN1-207ENST00000556821 RPS6KA5O75582 802 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 U2AF2P26368 475 aaKnown RBP eCLIP25.37■■□□□ 1.659e-8■■■■□ 23.4
PABPN1-207ENST00000556821 TMOD1P28289 359 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 TXKP42681 527 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 MRE11P49959 708 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 NLRP11P59045 1033 aaKnown RBP25.37■■□□□ 1.65
PABPN1-207ENST00000556821 CYP4A11Q02928 519 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 FAM228AQ86W67 206 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 C4orf19Q8IY42 314 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 CRIPAKQ8N1N5 446 aa25.37■■□□□ 1.65
PABPN1-207ENST00000556821 ZNF579Q8NAF0 562 aaKnown RBP25.37■■□□□ 1.65
PABPN1-207ENST00000556821 RC3H2Q9HBD1 1191 aaKnown RBP25.37■■□□□ 1.65
PABPN1-207ENST00000556821 MYH15Q9Y2K3 1946 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 MGEA5O60502 916 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 MAFO75444 373 aaPredicted RBP25.36■■□□□ 1.65
PABPN1-207ENST00000556821 GPC3P51654 580 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 NPEPPSP55786 919 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 NFX1Q12986 1120 aaKnown RBP25.36■■□□□ 1.65
PABPN1-207ENST00000556821 CTTNQ14247 550 aaKnown RBP25.36■■□□□ 1.65
PABPN1-207ENST00000556821 ZNF668Q96K58 619 aaPredicted RBP25.36■■□□□ 1.65
PABPN1-207ENST00000556821 CYP26B1Q9NR63 512 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 LMCD1Q9NZU5 365 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 ST3GAL5Q9UNP4 418 aa25.36■■□□□ 1.65
PABPN1-207ENST00000556821 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.35■■□□□ 1.65
PABPN1-207ENST00000556821 POTEMA6NI47 508 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 DKC1O60832 514 aaKnown RBP eCLIP25.35■■□□□ 1.65
PABPN1-207ENST00000556821 GJB2P29033 226 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 ERVK-21P61565 698 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 ORC2Q13416 577 aaPredicted RBP25.35■■□□□ 1.65
PABPN1-207ENST00000556821 ZNF174Q15697 407 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 TTC38Q5R3I4 469 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 SNX27Q96L92 541 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 YME1L1Q96TA2 773 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 HSD17B14Q9BPX1 270 aa25.35■■□□□ 1.65
PABPN1-207ENST00000556821 EIF2AK1Q9BQI3 630 aaKnown RBP25.35■■□□□ 1.65
PABPN1-207ENST00000556821 ZBTB39O15060 712 aa25.34■■□□□ 1.65
PABPN1-207ENST00000556821 SLITRK3O94933 977 aa25.34■■□□□ 1.65
PABPN1-207ENST00000556821 YWHABP31946 246 aaKnown RBP25.34■■□□□ 1.65
PABPN1-207ENST00000556821 TOB1P50616 345 aaPredicted RBP25.34■■□□□ 1.65
PABPN1-207ENST00000556821 GNL2Q13823 731 aaKnown RBP25.34■■□□□ 1.65
PABPN1-207ENST00000556821 NBR1Q14596 966 aa25.34■■□□□ 1.65
PABPN1-207ENST00000556821 TGS1Q96RS0 853 aaKnown RBP25.34■■□□□ 1.65
PABPN1-207ENST00000556821 ZSWIM4Q9H7M6 989 aa25.34■■□□□ 1.65
PABPN1-207ENST00000556821 MTUS1Q9ULD2 1270 aa25.34■■□□□ 1.65
PABPN1-207ENST00000556821 KIF3AQ9Y496 699 aa25.34■■□□□ 1.65
PABPN1-207ENST00000556821 TRAPPC10P48553 1259 aa25.33■■□□□ 1.65
PABPN1-207ENST00000556821 FAM178BQ8IXR5 827 aa25.33■■□□□ 1.65
PABPN1-207ENST00000556821 C17orf80Q9BSJ5 609 aa25.33■■□□□ 1.65
PABPN1-207ENST00000556821 DHX33Q9H6R0 707 aaKnown RBP25.33■■□□□ 1.65
PABPN1-207ENST00000556821 MYO7AQ13402 2215 aa25.33■■□□□ 1.65
PABPN1-207ENST00000556821 MYH11P35749 1972 aa25.33■■□□□ 1.64
PABPN1-207ENST00000556821 GPR182O15218 404 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 LYPLA2O95372 231 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 OR52Z1P0C646 297 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 EIF4BP23588 611 aaKnown RBP25.32■■□□□ 1.64
PABPN1-207ENST00000556821 TPH2Q8IWU9 490 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 GJD3Q8N144 294 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 ZNF710Q8N1W2 664 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 NEK9Q8TD19 979 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 GDPD5Q8WTR4 605 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 ZNF689Q96CS4 500 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-207ENST00000556821 CEP170P1Q96L14 293 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 BRWD1Q9NSI6 2320 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 ADGRA3Q8IWK6 1321 aa25.32■■□□□ 1.64
PABPN1-207ENST00000556821 DGKIO75912 1065 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 LINC00271P0C7V0 271 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 DARSP14868 501 aaKnown RBP25.31■■□□□ 1.64
PABPN1-207ENST00000556821 NHLH1Q02575 133 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 DSC3Q14574 896 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 ODR4Q5SWX8 454 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 NPAS4Q8IUM7 802 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 C4orf32Q8N8J7 132 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 ADAM2Q99965 735 aa25.31■■□□□ 1.64
PABPN1-207ENST00000556821 NOL7Q9UMY1 257 aaKnown RBP25.31■■□□□ 1.64
PABPN1-207ENST00000556821 LEXMQ3ZCV2 418 aa25.3■■□□□ 1.64
PABPN1-207ENST00000556821 FAM43BQ6ZT52 329 aaPredicted RBP25.3■■□□□ 1.64
PABPN1-207ENST00000556821 RGS18Q9NS28 235 aa25.3■■□□□ 1.64
PABPN1-207ENST00000556821 BMP2KQ9NSY1 1161 aaPredicted RBP25.3■■□□□ 1.64
PABPN1-207ENST00000556821 SUCLA2Q9P2R7 463 aaPredicted RBP25.3■■□□□ 1.64
PABPN1-207ENST00000556821 SMC3Q9UQE7 1217 aa25.3■■□□□ 1.64
PABPN1-207ENST00000556821 PPME1Q9Y570 386 aa25.3■■□□□ 1.64
PABPN1-207ENST00000556821 PCDHB6Q9Y5E3 794 aa25.3■■□□□ 1.64
PABPN1-207ENST00000556821 C9IYK1 514 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 SPATA31C1P0DKV0 1188 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 POLGP54098 1239 aaPredicted RBP25.29■■□□□ 1.64
PABPN1-207ENST00000556821 CUL4AQ13619 759 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 XKR9Q5GH70 373 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 KSR1Q8IVT5 923 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.29■■□□□ 1.64
PABPN1-207ENST00000556821 NLRP7Q8WX94 980 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 SLC7A3Q8WY07 619 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 SCLT1Q96NL6 688 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 JPH2Q9BR39 696 aaPredicted RBP25.29■■□□□ 1.64
PABPN1-207ENST00000556821 KCNH6Q9H252 994 aa25.29■■□□□ 1.64
PABPN1-207ENST00000556821 A0A087WZ62 844 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 CSDE1O75534 798 aaKnown RBP25.28■■□□□ 1.64
PABPN1-207ENST00000556821 FGFR4P22455 802 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 RFC5P40937 340 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 TECP42680 631 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms