RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 COBLL1Q53SF7 1204 aa12.85□□□□□ -0.35
APEX1-210ENST00000555414 L1TD1Q5T7N2 865 aaKnown RBP12.85□□□□□ -0.35
APEX1-210ENST00000555414 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
APEX1-210ENST00000555414 SFR1Q86XK3 245 aa12.85□□□□□ -0.35
APEX1-210ENST00000555414 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
APEX1-210ENST00000555414 DHTKD1Q96HY7 919 aaPredicted RBP12.85□□□□□ -0.35
APEX1-210ENST00000555414 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
APEX1-210ENST00000555414 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
APEX1-210ENST00000555414 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
APEX1-210ENST00000555414 MYH9P35579 1960 aaKnown RBP12.85□□□□□ -0.35
APEX1-210ENST00000555414 PHLPP2Q6ZVD8 1323 aa12.85□□□□□ -0.35
APEX1-210ENST00000555414 IGKV6-21A0A0C4DH24 114 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 SMTNL1A8MU46 457 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 BECN2A8MW95 431 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 ERCC5P28715 1186 aaPredicted RBP12.84□□□□□ -0.35
APEX1-210ENST00000555414 ACLYP53396 1101 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 TPM4P67936 248 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
APEX1-210ENST00000555414 EHHADHQ08426 723 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 DPCR1Q3MIW9 517 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 CCSAPQ6IQ19 270 aaPredicted RBP12.84□□□□□ -0.35
APEX1-210ENST00000555414 NFRKBQ6P4R8 1299 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 MYOCDQ8IZQ8 938 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
APEX1-210ENST00000555414 SPIRE2Q8WWL2 714 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 ARMC5Q96C12 935 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 DEFB118Q96PH6 123 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 NTPCRQ9BSD7 190 aaKnown RBP12.84□□□□□ -0.35
APEX1-210ENST00000555414 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 KMT5AQ9NQR1 393 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
APEX1-210ENST00000555414 SUCLA2Q9P2R7 463 aaPredicted RBP12.84□□□□□ -0.35
APEX1-210ENST00000555414 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 RSPH10B2B2RC85 870 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 DNM1LO00429 736 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 GCNT3O95395 438 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 C22orf31O95567 290 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.36
APEX1-210ENST00000555414 RSPH10BP0C881 870 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 ARL2P36404 184 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 PEX3P56589 373 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 STK4Q13043 487 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 MAPK7Q13164 816 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 ZNF720Q7Z2F6 126 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 DAW1Q8N136 415 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 ADSSL1Q8N142 457 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 FAM200AQ8TCP9 573 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 ZNF333Q96JL9 665 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 TSG101Q99816 390 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 DNAJC25Q9H1X3 360 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 XPNPEP1Q9NQW7 623 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 EXOC7Q9UPT5 735 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 PCDHA2Q9Y5H9 948 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 UBE4BO95155 1302 aa12.83□□□□□ -0.36
APEX1-210ENST00000555414 GOLGA6L19H0YKK7 550 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 K7ENM7 598 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 EIF3DO15371 548 aaKnown RBP eCLIP12.82□□□□□ -0.365e-15■■□□□ 13.2
APEX1-210ENST00000555414 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
APEX1-210ENST00000555414 GJB1P08034 283 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 BMP6P22004 513 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 PRCPP42785 496 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 NAMPTP43490 491 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 EFNA5P52803 228 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
APEX1-210ENST00000555414 PAK1Q13153 545 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 GSE1Q14687 1217 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 MTFR1Q15390 333 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 TPD52L1Q16890 204 aaPredicted RBP12.82□□□□□ -0.36
APEX1-210ENST00000555414 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 RSPH3Q86UC2 560 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 NME8Q8N427 588 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 DEPTORQ8TB45 409 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 TRAPPC12Q8WVT3 735 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
APEX1-210ENST00000555414 HVCN1Q96D96 273 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 C2orf40Q9H1Z8 148 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 GPRC5CQ9NQ84 441 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 OGDHLQ9ULD0 1010 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 PHF24Q9UPV7 400 aa12.82□□□□□ -0.36
APEX1-210ENST00000555414 SMIM35A0A1B0GVV1 85 aa12.81□□□□□ -0.36
APEX1-210ENST00000555414 MBLAC1A4D2B0 266 aaPredicted RBP12.81□□□□□ -0.36
APEX1-210ENST00000555414 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
APEX1-210ENST00000555414 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
APEX1-210ENST00000555414 SGPL1O95470 568 aa12.81□□□□□ -0.36
APEX1-210ENST00000555414 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms