RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LARP4Q71RC2 724 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCFD1-213ENST00000554776 LIMS2Q7Z4I7 341 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 ZZZ3Q8IYH5 903 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 BCL6BQ8N143 479 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-213ENST00000554776 TTC9BQ8N6N2 239 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 ZNF610Q8N9Z0 462 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 ATL2Q8NHH9 583 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 RTF1Q92541 710 aaKnown RBP4.3□□□□□ -1.72
SCFD1-213ENST00000554776 SLC5A5Q92911 643 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 MAML3Q96JK9 1138 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 SAMD11Q96NU1 681 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 PTPN18Q99952 460 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 MS4A5Q9H3V2 200 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 KLHL42Q9P2K6 505 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 CDC42EP3Q9UKI2 254 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 NPEPPSL1A6NEC2 478 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 GPR42O15529 346 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 CD40P25942 277 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 RRADP55042 308 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 ADCY1Q08828 1119 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 MAP3K12Q12852 859 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 NFYCQ13952 458 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 STAT4Q14765 748 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 DDB1Q16531 1140 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 RNF151Q2KHN1 245 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 SPATS1Q496A3 300 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 BROXQ5VW32 411 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 PRRT2Q7Z6L0 340 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-213ENST00000554776 C11orf74Q86VG3 221 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 PHYKPLQ8IUZ5 450 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 PASD1Q8IV76 773 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 C7orf31Q8N865 590 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 NEIL1Q96FI4 390 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-213ENST00000554776 SEMA4AQ9H3S1 761 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 JADE2Q9NQC1 790 aa4.29□□□□□ -1.72
SCFD1-213ENST00000554776 G3BP2Q9UN86 482 aaKnown RBP4.29□□□□□ -1.72
SCFD1-213ENST00000554776 LCHNA4D1U4 455 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 GPR39O43194 453 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 MARCH6O60337 910 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 PDGFRBP09619 1106 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 MAGEA10P43363 369 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-213ENST00000554776 KRTAP10-2P60368 255 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 PCOLCEQ15113 449 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 TBR1Q16650 682 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 PLEKHG6Q3KR16 790 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 ZNF568Q3ZCX4 644 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 AGBL4Q5VU57 503 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 KANSL1Q7Z3B3 1105 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 CIR1Q86X95 450 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-213ENST00000554776 CLRN3Q8NCR9 226 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 DNERQ8NFT8 737 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 OR5AN1Q8NGI8 311 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 ZNF496Q96IT1 587 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-213ENST00000554776 TUBGCP5Q96RT8 1024 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 LMF1Q96S06 567 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 KIAA1683Q9H0B3 1180 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 POFUT1Q9H488 388 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 HOMER2Q9NSB8 354 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 SMPD4Q9NXE4 827 aa4.28□□□□□ -1.72
SCFD1-213ENST00000554776 USP36Q9P275 1121 aaKnown RBP4.28□□□□□ -1.72
SCFD1-213ENST00000554776 MATN2O00339 956 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 ELL2O00472 640 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-213ENST00000554776 ARHGAP6O43182 974 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 LSP1P33241 339 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 MRE11P49959 708 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 MEOX1P50221 254 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 STAT5BP51692 787 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 BCAR1P56945 870 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 SESN3P58005 492 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 RAC3P60763 192 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
SCFD1-213ENST00000554776 BRDTQ58F21 947 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-213ENST00000554776 ZBTB41Q5SVQ8 909 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 PRAMEF9Q5VWM5 478 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 KIAA1841Q6NSI8 718 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 USP30Q70CQ3 517 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 RASSF3Q86WH2 238 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 RTKN2Q8IZC4 609 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 CFHR4Q92496 578 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 LOXL4Q96JB6 756 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 MYL10Q9BUA6 226 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 PITHD1Q9GZP4 211 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-213ENST00000554776 HAPLN2Q9GZV7 340 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 OR10A2Q9H208 303 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 CD248Q9HCU0 757 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 KCMF1Q9P0J7 381 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 MSRAQ9UJ68 235 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 VWA7Q9Y334 891 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 NR2E1Q9Y466 385 aa4.27□□□□□ -1.73
SCFD1-213ENST00000554776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 PATE3B3GLJ2 98 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 KDM1AO60341 852 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 ULK1O75385 1050 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 KATNA1O75449 491 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 PRPF6O94906 941 aaKnown RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 CPEP16870 476 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 GUCY2FP51841 1108 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 ANTXR2P58335 489 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms