RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 LAG3P18627 525 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 SFPQP23246 707 aaKnown RBP eCLIP10.5□□□□□ -0.73
YBX3-218ENST00000546298 GATMP50440 423 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 EPHA7Q15375 998 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 ME3Q16798 604 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 FAM102BQ5T8I3 360 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 ZNF410Q86VK4 478 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 NECAB1Q8N987 351 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.5□□□□□ -0.73
YBX3-218ENST00000546298 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 MICAL1Q8TDZ2 1067 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 POF1BQ8WVV4 589 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 RSPH1Q8WYR4 309 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 SUCLA2Q9P2R7 463 aaPredicted RBP10.5□□□□□ -0.73
YBX3-218ENST00000546298 PUF60Q9UHX1 559 aaKnown RBP10.5□□□□□ -0.73
YBX3-218ENST00000546298 A0A0U1RQF3 1178 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 FSD2A1L4K1 749 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 H3BQ06 376 aaPredicted RBP10.49□□□□□ -0.73
YBX3-218ENST00000546298 EML1O00423 815 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 SKIP12755 728 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 FDPSP14324 419 aaKnown RBP10.49□□□□□ -0.73
YBX3-218ENST00000546298 HYAL1Q12794 435 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 SAFBQ15424 915 aaKnown RBP eCLIP10.49□□□□□ -0.73
YBX3-218ENST00000546298 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
YBX3-218ENST00000546298 ECHDC2Q86YB7 292 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 FAM178BQ8IXR5 827 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 THNSL1Q8IYQ7 743 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 GJD3Q8N144 294 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 SLC7A3Q8WY07 619 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 ZNF668Q96K58 619 aaPredicted RBP10.49□□□□□ -0.73
YBX3-218ENST00000546298 CEP170P1Q96L14 293 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 IGFLR1Q9H665 355 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 CYP26B1Q9NR63 512 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 TYW1Q9NV66 732 aaKnown RBP10.49□□□□□ -0.73
YBX3-218ENST00000546298 VAV3Q9UKW4 847 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 GBF1Q92538 1859 aa10.49□□□□□ -0.73
YBX3-218ENST00000546298 KAT6AQ92794 2004 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 A0A087WZ62 844 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 CARNS1A5YM72 827 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 GAS2O43903 313 aaKnown RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 FGFR1P11362 822 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 SSTR3P32745 418 aaPredicted RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 PPM1AP35813 382 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 RFC5P40937 340 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 POLGP54098 1239 aaPredicted RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 KRT17Q04695 432 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 NR5A1Q13285 461 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 ADAM15Q13444 863 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 CAMK1Q14012 370 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 CTC1Q2NKJ3 1217 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 NCAPH2Q6IBW4 605 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 ANO5Q75V66 913 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 RHPN2Q8IUC4 686 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 DIS3L2Q8IYB7 885 aaKnown RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 RNF169Q8NCN4 708 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 NSUN7Q8NE18 718 aaKnown RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 HAS1Q92839 578 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 CEP89Q96ST8 783 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 FDXACB1Q9BRP7 624 aaPredicted RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 TRAIPQ9BWF2 469 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
YBX3-218ENST00000546298 PRKAG3Q9UGI9 489 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 LZTS1Q9Y250 596 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 DOCK5Q9H7D0 1870 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 TTC3P53804 2025 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 MICAL3Q7RTP6 2002 aa10.48□□□□□ -0.73
YBX3-218ENST00000546298 TMEM150BA6NC51 233 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 BTBD18B2RXH4 712 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 ASAP2O43150 1006 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 FGF18O76093 207 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 CSPG5O95196 566 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 IL9P15248 144 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
YBX3-218ENST00000546298 NDUFV1P49821 464 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 RAB27AP51159 221 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 PLCB3Q01970 1234 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 DRP2Q13474 957 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 BMS1Q14692 1282 aaKnown RBP10.47□□□□□ -0.73
YBX3-218ENST00000546298 CALCRLQ16602 461 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 PLA2G4FQ68DD2 849 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 CATSPER4Q7RTX7 472 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 SRGAP1Q7Z6B7 1085 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 EFHBQ8N7U6 833 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 TCP11Q8WWU5 503 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 PSPC1Q8WXF1 523 aaKnown RBP10.47□□□□□ -0.73
YBX3-218ENST00000546298 TNFRSF25Q93038 417 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
YBX3-218ENST00000546298 NLRP4Q96MN2 994 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 ZNF558Q96NG5 402 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 CASD1Q96PB1 797 aa10.47□□□□□ -0.73
YBX3-218ENST00000546298 CDCA3Q99618 268 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms