RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 ZNF571Q7Z3V5 609 aaPredicted RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 GPBP1Q86WP2 473 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 LRRC57Q8N9N7 239 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 GJA10Q969M2 543 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 CCDC17Q96LX7 622 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 NCAPGQ9BPX3 1015 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 CENPHQ9H3R5 247 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 GEMIN8Q9NWZ8 242 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 KIAA1024Q9UPX6 916 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 PGRMC1O00264 195 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 GH2P01242 217 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 SNHG28P0DPA3 235 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 CTNNA1P35221 906 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 BIRC3Q13489 604 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 UAP1Q16222 522 aaPredicted RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 RNF187Q5TA31 235 aaPredicted RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 RUFY4Q6ZNE9 571 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 CUL5Q93034 780 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 SPAG5Q96R06 1193 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 NPHP3-ACAD11A0A0J9YXS1 232 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 CCDC188H7C350 402 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 SART1O43290 800 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 CYP11B2P19099 503 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 NR2F2P24468 414 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 FKBP1BP68106 108 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 VGLL4Q14135 290 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 LRRC47Q8N1G4 583 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 C3orf20Q8ND61 904 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 NAP1L4Q99733 375 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDB1-224ENST00000545894 PPANQ9NQ55 473 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 SLC26A4O43511 780 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 KRT18P05783 430 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 ACTN1P12814 892 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 UCHL3P15374 230 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 ANXA13P27216 316 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 MRPL12P52815 198 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 ACTN3Q08043 901 aaPredicted RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 IFT88Q13099 833 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 DRP2Q13474 957 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 MTMR3Q13615 1198 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 PLCB4Q15147 1175 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 DPY19L2P1Q6NXN4 242 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 ALKBH5Q6P6C2 394 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 C6orf89Q6UWU4 347 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDB1-224ENST00000545894 METTL13Q8N6R0 699 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 AP1M1Q9BXS5 423 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 GOLPH3Q9H4A6 298 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 VCPKMTQ9H867 229 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 SLC12A6Q9UHW9 1150 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
DDB1-224ENST00000545894 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
DDB1-224ENST00000545894 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 POTEB3A0JP26 581 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 FRMD3A2A2Y4 597 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 GMNCA6NCL1 334 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 KRIT1O00522 736 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
DDB1-224ENST00000545894 FLOT1O75955 427 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 ZBTB48P10074 688 aaPredicted RBP12.48□□□□□ -0.41
DDB1-224ENST00000545894 SLC9A1P19634 815 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 POTEBQ6S5H4 581 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 FRMD5Q7Z6J6 570 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 CLEC10AQ8IUN9 316 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 SCYL3Q8IZE3 742 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 OR2W6PQ8NHA6 318 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 LMBR1Q8WVP7 490 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 MYCBPQ99417 103 aaPredicted RBP12.48□□□□□ -0.41
DDB1-224ENST00000545894 ARMCX3Q9UH62 379 aaPredicted RBP12.48□□□□□ -0.41
DDB1-224ENST00000545894 ATAD5Q96QE3 1844 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 AFPP02771 609 aaKnown RBP12.48□□□□□ -0.41
DDB1-224ENST00000545894 PRKCIP41743 596 aa12.48□□□□□ -0.41
DDB1-224ENST00000545894 ZNF543Q08ER8 600 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms