RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NLRP11P59045 1033 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CCDC85BQ15834 202 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TMEM266Q2M3C6 531 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 NCAPH2Q6IBW4 605 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ANO5Q75V66 913 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 OTUD6AQ7L8S5 288 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EXOC8Q8IYI6 725 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LRRC71Q8N4P6 559 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SAMD11Q96NU1 681 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MTMR9Q96QG7 549 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CEP89Q96ST8 783 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 OSMRQ99650 979 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 BACH2Q9BYV9 841 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ADAMTS10Q9H324 1103 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TMX1Q9H3N1 280 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LMCD1Q9NZU5 365 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ST3GAL5Q9UNP4 418 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MTCH2Q9Y6C9 303 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ARID2Q68CP9 1835 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 UNC80Q8N2C7 3258 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 IGKV6-21A0A0C4DH24 114 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TMEM150BA6NC51 233 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 POTEMA6NI47 508 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 NEMFO60524 1076 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MAFO75444 373 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SLITRK3O94933 977 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 STAG3L1P0CL83 205 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EIF4BP23588 611 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TXKP42681 527 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SPIRE1Q08AE8 756 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 GRB10Q13322 594 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 GNL2Q13823 731 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SPRED2Q7Z698 418 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TPH2Q8IWU9 490 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 C4orf19Q8IY42 314 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FIBCD1Q8N539 461 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LINC01599Q8WXQ3 324 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 DYDC2Q96IM9 177 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TMX3Q96JJ7 454 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TBC1D32Q96NH3 1257 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SH2D3AQ9BRG2 576 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TTC12Q9H892 705 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CYP26B1Q9NR63 512 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RGS18Q9NS28 235 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RGL1Q9NZL6 768 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 KIF3AQ9Y496 699 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PPME1Q9Y570 386 aa10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TCF20Q9UGU0 1960 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-214ENST00000543048 KIAA1671Q9BY89 1806 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DENND3A2RUS2 1198 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 WNT7AO00755 349 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 LPXNO60711 386 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DGKIO75912 1065 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MCM7P33993 719 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SARSP49591 514 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 GPC3P51654 580 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NPEPPSP55786 919 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 FAM189BP81408 668 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ORC2Q13416 577 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DSG2Q14126 1118 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CTTNQ14247 550 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZNF174Q15697 407 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 EPC2Q52LR7 807 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NPAS4Q8IUM7 802 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TMEM192Q8IY95 271 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZNF689Q96CS4 500 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CEP170P1Q96L14 293 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ADAM2Q99965 735 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 LXNQ9BS40 222 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 C17orf80Q9BSJ5 609 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 GCOM2Q9BZD3 368 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 C1orf112Q9NSG2 853 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SUCLA2Q9P2R7 463 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MTUS1Q9ULD2 1270 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 LRFN2Q9ULH4 789 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PCDHB7Q9Y5E2 793 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MGEA5O60502 916 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 LYPLA2O95372 231 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 RB1P06400 928 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DARSP14868 501 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZSCAN20P17040 1043 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 U2AF2P26368 475 aaKnown RBP eCLIP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 YWHABP31946 246 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 RFC5P40937 340 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TRAPPC10P48553 1259 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 FOXK1P85037 733 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DRP2Q13474 957 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms