RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ACTN1P12814 892 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 CYP11B2P19099 503 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 ME1P48163 572 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 GPC3P51654 580 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 EPHB4P54760 987 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 DRP2Q13474 957 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 MXD4Q14582 209 aaPredicted RBP21.6■■□□□ 1.05
DDX55-207ENST00000540763 PLEKHG4Q58EX7 1191 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 TMEM240Q5SV17 173 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 ODR4Q5SWX8 454 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 AXDND1Q5T1B0 1012 aaPredicted RBP21.6■■□□□ 1.05
DDX55-207ENST00000540763 CNKSR3Q6P9H4 555 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 PADI6Q6TGC4 694 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 TSHZ1Q6ZSZ6 1077 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 C16orf59Q7L2K0 433 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 KCNK18Q7Z418 384 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 RASSF8Q8NHQ8 419 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 IPO9Q96P70 1041 aaKnown RBP21.6■■□□□ 1.05
DDX55-207ENST00000540763 TIPINQ9BVW5 301 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 MTIF3Q9H2K0 278 aaKnown RBP21.6■■□□□ 1.05
DDX55-207ENST00000540763 ADAMTS10Q9H324 1103 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 SUCLA2Q9P2R7 463 aaPredicted RBP21.6■■□□□ 1.05
DDX55-207ENST00000540763 STK17AQ9UEE5 414 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 PCDHA7Q9UN72 937 aa21.6■■□□□ 1.05
DDX55-207ENST00000540763 BAIAP3O94812 1187 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 FGBP02675 491 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 PLCG1P19174 1290 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 NLRP11P59045 1033 aaKnown RBP21.59■■□□□ 1.05
DDX55-207ENST00000540763 TMEM62Q0P6H9 643 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 LPIN1Q14693 890 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 KARSQ15046 597 aaKnown RBP21.59■■□□□ 1.05
DDX55-207ENST00000540763 ZRSR1Q15695 479 aaKnown RBP21.59■■□□□ 1.05
DDX55-207ENST00000540763 SPECC1Q5M775 1068 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 USP49Q70CQ1 688 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 DEFB128Q7Z7B8 93 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 SYT2Q8N9I0 419 aaPredicted RBP21.59■■□□□ 1.05
DDX55-207ENST00000540763 HERVK_113Q902F9 699 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.59■■□□□ 1.057e-8■■■□□ 15.9
DDX55-207ENST00000540763 COL4A3BPQ9Y5P4 624 aa21.59■■□□□ 1.05
DDX55-207ENST00000540763 A0A087WWV3 80 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 EFCAB14O75071 495 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 POU5F1BQ06416 359 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 KIZQ2M2Z5 673 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 CCDC73Q6ZRK6 1079 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 ZNF365Q70YC5 407 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 SEPT8Q92599 483 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 TMEM143Q96AN5 459 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 IFIH1Q9BYX4 1025 aaKnown RBP21.58■■□□□ 1.05
DDX55-207ENST00000540763 BLOC1S4Q9NUP1 217 aa21.58■■□□□ 1.05
DDX55-207ENST00000540763 PTPRSQ13332 1948 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 ACRP10323 421 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 GHRP10912 638 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 GUCY2CP25092 1073 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 ARL2P36404 184 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 SLC12A3P55017 1021 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 RASIP1Q5U651 963 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 ADALQ6DHV7 355 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 SHC4Q6S5L8 630 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 RHPN2Q8IUC4 686 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 DEFB123Q8N688 67 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 PRPF31Q8WWY3 499 aaKnown RBP21.57■■□□□ 1.04
DDX55-207ENST00000540763 LARP4BQ92615 738 aaKnown RBP21.57■■□□□ 1.04
DDX55-207ENST00000540763 RAD54LQ92698 747 aa21.57■■□□□ 1.04
DDX55-207ENST00000540763 INO80BQ9C086 356 aaPredicted RBP21.57■■□□□ 1.04
DDX55-207ENST00000540763 BMP2KQ9NSY1 1161 aaPredicted RBP21.57■■□□□ 1.04
DDX55-207ENST00000540763 ABHD14A-ACY1A0A1B0GW23 586 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 PLA2G4BP0C869 781 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 EIF4BP23588 611 aaKnown RBP21.56■■□□□ 1.04
DDX55-207ENST00000540763 LAMTOR4Q0VGL1 99 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 TFDP1Q14186 410 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 RRAGBQ5VZM2 374 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 RESP18Q5W5W9 173 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 RINT1Q6NUQ1 792 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 C1orf186Q6ZWK4 172 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 IFNLR1Q8IU57 520 aaPredicted RBP21.56■■□□□ 1.04
DDX55-207ENST00000540763 DBF4BQ8NFT6 615 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 NLRP7Q8WX94 980 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 KIFAP3Q92845 792 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 OSMRQ99650 979 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 PYM1Q9BRP8 204 aaKnown RBP21.56■■□□□ 1.04
DDX55-207ENST00000540763 NFKBIZQ9BYH8 718 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 GCOM2Q9BZD3 368 aaPredicted RBP21.56■■□□□ 1.04
DDX55-207ENST00000540763 POLR3FQ9H1D9 316 aaPredicted RBP21.56■■□□□ 1.04
DDX55-207ENST00000540763 COL6A3P12111 3177 aa21.56■■□□□ 1.04
DDX55-207ENST00000540763 DARSP14868 501 aaKnown RBP21.55■■□□□ 1.04
DDX55-207ENST00000540763 IKBKEQ14164 716 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 SHHQ15465 462 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 C9orf50Q5SZB4 431 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 LRRC15Q8TF66 581 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 TMEM40Q8WWA1 233 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 SCLT1Q96NL6 688 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 PLIN2Q99541 437 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 FTHL17Q9BXU8 183 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 CUEDC2Q9H467 287 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 CDHR5Q9HBB8 845 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 FAM13BQ9NYF5 915 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 GINS2Q9Y248 185 aa21.55■■□□□ 1.04
DDX55-207ENST00000540763 A0A087WZ62 844 aa21.54■■□□□ 1.04
DDX55-207ENST00000540763 GPR182O15218 404 aa21.54■■□□□ 1.04
DDX55-207ENST00000540763 RPS6KA5O75582 802 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms