RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 TCP11Q8WWU5 503 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 CCDC34Q96HJ3 373 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
CYB561A3-214ENST00000540139 A0A087X0B3 334 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 A0A1B0GVL5 298 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 E9PMD0 336 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 POLR2DO15514 142 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 ASAP2O43150 1006 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 TREHO43280 583 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 B4GALT4O60513 344 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 MYL1P05976 194 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 RTP1P59025 263 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 LRRC26Q2I0M4 334 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 IER5Q5VY09 327 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 C1orf186Q6ZWK4 172 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 CTAGE1Q96RT6 745 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 C17orf75Q9HAS0 396 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 ATP6V0A4Q9HBG4 840 aa13.14□□□□□ -0.31
CYB561A3-214ENST00000540139 ZNF202O95125 648 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 TIE1P35590 1138 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 NDUFA8P51970 172 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 POLGP54098 1239 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 BFSP2Q13515 415 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 MXD4Q14582 209 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 PLA2G4FQ68DD2 849 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 EFCAB12Q6NXP0 572 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 PDILTQ8N807 584 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 KIFAP3Q92845 792 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 MTRQ99707 1265 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 LMBRD1Q9NUN5 540 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 NOD1Q9Y239 953 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
CYB561A3-214ENST00000540139 TRIP12Q14669 1992 aaPredicted RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 TMEM150BA6NC51 233 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 KIAA0355O15063 1070 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 CLTBP09497 229 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 CYP2C9P11712 490 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 PTMSP20962 102 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 SCP2P22307 547 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 ARL2P36404 184 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 IGBP1P78318 339 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 ZNF200P98182 395 aaPredicted RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 FAAP100Q0VG06 881 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 EMC2Q15006 297 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 FAM26DQ5JW98 314 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.318e-9■■■■□ 21.6
CYB561A3-214ENST00000540139 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 METTL3Q86U44 580 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 LRRC15Q8TF66 581 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 TRAPPC12Q8WVT3 735 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 DHX58Q96C10 678 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 PLIN2Q99541 437 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 XPNPEP1Q9NQW7 623 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 TBX21Q9UL17 535 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 ODF2LQ9ULJ1 636 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 SQORQ9Y6N5 450 aa13.12□□□□□ -0.31
CYB561A3-214ENST00000540139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.11□□□□□ -0.31
CYB561A3-214ENST00000540139 A0A087WWV3 80 aa13.11□□□□□ -0.31
CYB561A3-214ENST00000540139 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
CYB561A3-214ENST00000540139 MCM4P33991 863 aa13.11□□□□□ -0.31
CYB561A3-214ENST00000540139 TUSC1Q2TAM9 212 aa13.11□□□□□ -0.31
CYB561A3-214ENST00000540139 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
CYB561A3-214ENST00000540139 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms