RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 MCM9Q9NXL9 1143 aa6.86□□□□□ -1.31
CHEK1-216ENST00000534070 AKAP7Q9P0M2 348 aaPredicted RBP6.86□□□□□ -1.31
CHEK1-216ENST00000534070 TRIM17Q9Y577 477 aa6.86□□□□□ -1.31
CHEK1-216ENST00000534070 SPAG9O60271 1321 aaKnown RBP6.86□□□□□ -1.31
CHEK1-216ENST00000534070 PLEKHG2Q9H7P9 1386 aa6.86□□□□□ -1.31
CHEK1-216ENST00000534070 BACH1O14867 736 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 TMOD1P28289 359 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 LRMPQ12912 555 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 SDCCAG8Q86SQ7 713 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 TMEM151BQ8IW70 566 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 NUP93Q8N1F7 819 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 GOT1L1Q8NHS2 421 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 HHIPQ96QV1 700 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ADPGKQ9BRR6 497 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ACAT2Q9BWD1 397 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ORC3Q9UBD5 711 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 MTF2Q9Y483 593 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 SGTAO43765 313 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 USO1O60763 962 aaKnown RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 CYP17A1P05093 508 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 RPS6KB1P23443 525 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 POLD2P49005 469 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 MOGSQ13724 837 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 FAM26FQ5R3K3 315 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ERCC4Q92889 916 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 FNBP1Q96RU3 617 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 BAG1Q99933 345 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 PCDHA9Q9Y5H5 950 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ITIH6Q6UXX5 1313 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 MYBBP1AQ9BQG0 1328 aaKnown RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ACKR2O00590 384 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 FAPQ12884 760 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ZNF75CPQ92670 426 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 USP13Q92995 863 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 ZUFSPQ96AP4 578 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 RWDD1Q9H446 243 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 LIN28AQ9H9Z2 209 aaKnown RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 FAM53CQ9NYF3 392 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 LRP2BPQ9P2M1 347 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 SH3BGRL2Q9UJC5 107 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 COL5A3P25940 1745 aaPredicted RBP6.85□□□□□ -1.31
CHEK1-216ENST00000534070 MAPK8IP3Q9UPT6 1336 aa6.85□□□□□ -1.31
CHEK1-216ENST00000534070 CDK12Q9NYV4 1490 aaPredicted RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 THAP12O43422 761 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 GLRX3O76003 335 aaKnown RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 ZBED1O96006 694 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 TP53P04637 393 aaPredicted RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 SF3B3Q15393 1217 aaKnown RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 ARSIQ5FYB1 569 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 SLC9B2Q86UD5 537 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 CREG2Q8IUH2 290 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 CPOQ8IVL8 374 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 ANKRD49Q8WVL7 239 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 C1orf74Q96LT6 269 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 RUNDC3BQ96NL0 473 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 GHITMQ9H3K2 345 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 APOBEC2Q9Y235 224 aaKnown RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 MAN1A2O60476 641 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 KCNJ4P48050 445 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 PAPOLAP51003 745 aaKnown RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 RBM5P52756 815 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 PMS1P54277 932 aaKnown RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 ICA1Q05084 483 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 EFR3AQ14156 821 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 RAB3GAP1Q15042 981 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 RAB12Q6IQ22 244 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 CCDC33Q8N5R6 958 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 FERMT2Q96AC1 680 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 CNDP1Q96KN2 507 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 CNDP2Q96KP4 475 aaKnown RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 ZNF396Q96N95 335 aaPredicted RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 WDR24Q96S15 920 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 RPAP3Q9H6T3 665 aaPredicted RBP6.84□□□□□ -1.31
CHEK1-216ENST00000534070 PLSCR4Q9NRQ2 329 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 OGFRQ9NZT2 677 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 COQ6Q9Y2Z9 468 aa6.84□□□□□ -1.31
CHEK1-216ENST00000534070 C2orf81A6NN90 581 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 CTIFO43310 598 aaKnown RBP6.84□□□□□ -1.32
CHEK1-216ENST00000534070 KIF1CO43896 1103 aaKnown RBP6.84□□□□□ -1.32
CHEK1-216ENST00000534070 CRTAMO95727 393 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.32
CHEK1-216ENST00000534070 GZMAP12544 262 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 KRT13P13646 458 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 HNF4AP41235 474 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 CNSTQ6PJW8 725 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 LRRTM4Q86VH4 590 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 DCLK2Q8N568 766 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 SMC1BQ8NDV3 1235 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 GIMAP1Q8WWP7 306 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 TIGD1Q96MW7 591 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 NIFKQ9BYG3 293 aaKnown RBP6.84□□□□□ -1.32
CHEK1-216ENST00000534070 COLQQ9Y215 455 aaPredicted RBP6.84□□□□□ -1.32
CHEK1-216ENST00000534070 SNX13Q9Y5W8 968 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 TUBGCP6Q96RT7 1819 aa6.84□□□□□ -1.32
CHEK1-216ENST00000534070 A0A1W2PP55 124 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms