RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ATRIPQ8WXE1 791 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 AZI2Q9H6S1 392 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 ZSWIM5Q9P217 1185 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 EPS15L1Q9UBC2 864 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 FRYQ5TBA9 3013 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 PNMA6FA0A0J9YX94 578 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 SLC30A4O14863 429 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 ITGB5P18084 799 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 MX1P20591 662 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 KLRC1P26715 233 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 GBP2P32456 591 aaPredicted RBP15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 POLGP54098 1239 aaPredicted RBP15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 PTPN14Q15678 1187 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 USP17L6PQ6QN14 398 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 ECHDC2Q86YB7 292 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 NXPE3Q969Y0 559 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 COL26A1Q96A83 441 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 EVI5LQ96CN4 794 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 MYADMQ96S97 322 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 OSMRQ99650 979 aa15.91■□□□□ 0.14
NKX3-1-202ENST00000523261 EVPLQ92817 2033 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 ZNF213O14771 459 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 LAMTOR5O43504 91 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 CYTH3O43739 400 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 LILRB5O75023 590 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 CRYBB1P53674 252 aaPredicted RBP15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 STARD6P59095 220 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 KIZQ2M2Z5 673 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 PLPPR4Q7Z2D5 763 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 NELL1Q92832 810 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 WDR6Q9NNW5 1121 aaKnown RBP15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 SLC2A4RGQ9NR83 387 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 SPATA6Q9NWH7 488 aaPredicted RBP15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 ANGPTL2Q9UKU9 493 aa15.9■□□□□ 0.14
NKX3-1-202ENST00000523261 ZZEF1O43149 2961 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 ASPMQ8IZT6 3477 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 MEIS2O14770 477 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 CLCN4P51793 760 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 CSTF1Q05048 431 aaKnown RBP15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 WTAPQ15007 396 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 IFIT1BQ5T764 474 aaKnown RBP15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 DDX53Q86TM3 631 aaKnown RBP15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 RNF169Q8NCN4 708 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 CMASQ8NFW8 434 aaPredicted RBP15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 NETO1Q8TDF5 533 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 HELQQ8TDG4 1101 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 PPP1R16BQ96T49 567 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 JPH1Q9HDC5 661 aaPredicted RBP15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 ZSCAN32Q9NX65 697 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 UBIAD1Q9Y5Z9 338 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 SALL3Q9BXA9 1300 aa15.89■□□□□ 0.13
NKX3-1-202ENST00000523261 PIK3CDO00329 1044 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 TBC1D4O60343 1298 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 STAT5BP51692 787 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 MTMR1Q13613 665 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 SEC23AQ15436 765 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 BCL7CQ8WUZ0 217 aaPredicted RBP15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 STAMQ92783 540 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 IGSF21Q96ID5 467 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 KLHL5Q96PQ7 755 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 MRPL9Q9BYD2 267 aaKnown RBP15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 SLC9A2Q9UBY0 812 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 CLUHO75153 1309 aa15.88■□□□□ 0.13
NKX3-1-202ENST00000523261 COL4A3Q01955 1670 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 GPR32O75388 356 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 KLRC2P26717 231 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 ACTR2P61160 394 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 GRM4Q14833 912 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 CUL5Q93034 780 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 SHDQ96IW2 340 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 UBAC1Q9BSL1 405 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 VN1R3Q9BXE9 311 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 BCO2Q9BYV7 579 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 RHOBTB2Q9BYZ6 727 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 GMEB2Q9UKD1 530 aa15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 SETXQ7Z333 2677 aaKnown RBP15.87■□□□□ 0.13
NKX3-1-202ENST00000523261 SPEGQ15772 3267 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 KANSL1LA0AUZ9 987 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 ANHXE9PGG2 379 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 MAFGO15525 162 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 ZC3H11AO75152 810 aaKnown RBP eCLIP15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 CNPP09543 421 aaKnown RBP15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 PMLP29590 882 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 HTR4Q13639 388 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 DDX23Q9BUQ8 820 aaKnown RBP15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 JADE2Q9NQC1 790 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 COL1A2P08123 1366 aa15.86■□□□□ 0.13
NKX3-1-202ENST00000523261 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 ZBTB42B2RXF5 422 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 HBP1O60381 514 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 VTNP04004 478 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms