RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 NLRP7Q8WX94 980 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 ARNTL2Q8WYA1 636 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
PABPC1-221ENST00000522720 ZNF668Q96K58 619 aaPredicted RBP18.3■□□□□ 0.52
PABPC1-221ENST00000522720 POLR3CQ9BUI4 534 aaPredicted RBP18.3■□□□□ 0.52
PABPC1-221ENST00000522720 TUFT1Q9NNX1 390 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.3■□□□□ 0.52
PABPC1-221ENST00000522720 ARID2Q68CP9 1835 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 EPOPA6NHQ4 379 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
PABPC1-221ENST00000522720 GAS2O43903 313 aaKnown RBP18.29■□□□□ 0.52
PABPC1-221ENST00000522720 MGEA5O60502 916 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 PDCP20941 246 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 RPA1P27694 616 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 ZNF410Q86VK4 478 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 RHPN2Q8IUC4 686 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 NPAS4Q8IUM7 802 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
PABPC1-221ENST00000522720 SCLT1Q96NL6 688 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 TGS1Q96RS0 853 aaKnown RBP18.29■□□□□ 0.52
PABPC1-221ENST00000522720 ADAM2Q99965 735 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 GCOM2Q9BZD3 368 aaPredicted RBP18.29■□□□□ 0.52
PABPC1-221ENST00000522720 RGS18Q9NS28 235 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
PABPC1-221ENST00000522720 A0A087WZ62 844 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 DENND3A2RUS2 1198 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 MED24O75448 989 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 DGKIO75912 1065 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 SARSP49591 514 aaKnown RBP18.28■□□□□ 0.52
PABPC1-221ENST00000522720 RARRES1P49788 294 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 DSC3Q14574 896 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 EMC2Q15006 297 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 SLC24A5Q71RS6 500 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 KSR1Q8IVT5 923 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 PIGOQ8TEQ8 1089 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 TCP11Q8WWU5 503 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 PSPC1Q8WXF1 523 aaKnown RBP18.28■□□□□ 0.52
PABPC1-221ENST00000522720 SNX21Q969T3 373 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
PABPC1-221ENST00000522720 FDXACB1Q9BRP7 624 aaPredicted RBP18.28■□□□□ 0.52
PABPC1-221ENST00000522720 RC3H2Q9HBD1 1191 aaKnown RBP18.28■□□□□ 0.52
PABPC1-221ENST00000522720 PRRC2BQ5JSZ5 2229 aaKnown RBP18.28■□□□□ 0.52
PABPC1-221ENST00000522720 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
PABPC1-221ENST00000522720 A0A087WWV3 80 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 C9IYK1 514 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 RFXAPO00287 272 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 ASAP2O43150 1006 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 DGAT1O75907 488 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 STAG3L1P0CL83 205 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 POU3F3P20264 500 aaPredicted RBP18.27■□□□□ 0.52
PABPC1-221ENST00000522720 MUTP22033 750 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 IGFBP4P22692 258 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 PRPHP41219 470 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 IGSF22Q8N9C0 903 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 PRPF31Q8WWY3 499 aaKnown RBP18.27■□□□□ 0.52
PABPC1-221ENST00000522720 NACC1Q96RE7 527 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 MTRQ99707 1265 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 RAB34Q9BZG1 259 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 INO80BQ9C086 356 aaPredicted RBP18.27■□□□□ 0.52
PABPC1-221ENST00000522720 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
PABPC1-221ENST00000522720 LRWD1Q9UFC0 647 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 DBR1Q9UK59 544 aaKnown RBP18.27■□□□□ 0.52
PABPC1-221ENST00000522720 COL4A3BPQ9Y5P4 624 aa18.27■□□□□ 0.52
PABPC1-221ENST00000522720 CSDE1O75534 798 aaKnown RBP18.26■□□□□ 0.51
PABPC1-221ENST00000522720 FAM189BP81408 668 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 LAMTOR4Q0VGL1 99 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 IL17AQ16552 155 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 HAUS3Q68CZ6 603 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 BRAPQ7Z569 592 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 FIBCD1Q8N539 461 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 NLRP4Q96MN2 994 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 SAMD11Q96NU1 681 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 C17orf80Q9BSJ5 609 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 IFT122Q9HBG6 1241 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 XPNPEP1Q9NQW7 623 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 BMP2KQ9NSY1 1161 aaPredicted RBP18.26■□□□□ 0.51
PABPC1-221ENST00000522720 STK24Q9Y6E0 443 aa18.26■□□□□ 0.51
PABPC1-221ENST00000522720 ZSCAN20P17040 1043 aaPredicted RBP18.25■□□□□ 0.51
PABPC1-221ENST00000522720 FGFR4P22455 802 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 ATP2C1P98194 919 aaPredicted RBP18.25■□□□□ 0.51
PABPC1-221ENST00000522720 GRB10Q13322 594 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 POTEGQ6S5H5 508 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 DTHD1Q6ZMT9 781 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 CCDC43Q96MW1 224 aaKnown RBP18.25■□□□□ 0.51
PABPC1-221ENST00000522720 ATP6V0A4Q9HBG4 840 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 LRFN2Q9ULH4 789 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 PCDHB7Q9Y5E2 793 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 EYSQ5T1H1 3165 aa18.25■□□□□ 0.51
PABPC1-221ENST00000522720 ADGRA3Q8IWK6 1321 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 VPS37CA5D8V6 355 aaPredicted RBP18.24■□□□□ 0.51
PABPC1-221ENST00000522720 LPXNO60711 386 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 SRGAP2CP0DJJ0 459 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 SYT1P21579 422 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 SFPQP23246 707 aaKnown RBP eCLIP18.24■□□□□ 0.51
PABPC1-221ENST00000522720 ARL2P36404 184 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 CCT6AP40227 531 aaKnown RBP18.24■□□□□ 0.51
PABPC1-221ENST00000522720 BTG3Q14201 252 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms