RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CLUHO75153 1309 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 FAM170BA6NMN3 283 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 TBC1D4O60343 1298 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 KCNA2P16389 499 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 GPC5P78333 572 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 LONRF3Q496Y0 759 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 ODR4Q5SWX8 454 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 PRR23BQ6ZRT6 265 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 GET4Q7L5D6 327 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 PPFIBP1Q86W92 1011 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 NME8Q8N427 588 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 OTUD7AQ8TE49 926 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-234ENST00000522227 KANSL1LA0AUZ9 987 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 B4E1Z4 1266 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 LILRB5O75023 590 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 VTNP04004 478 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 CLCN4P51793 760 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 STARD6P59095 220 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 DSC3Q14574 896 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 WTAPQ15007 396 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 PCNX4Q63HM2 1172 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 IL31Q6EBC2 164 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 ENAHQ8N8S7 591 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 STAMQ92783 540 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 SHDQ96IW2 340 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 ZNF668Q96K58 619 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 FAM227BQ96M60 508 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 RPP25Q9BUL9 199 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 NUMBLQ9Y6R0 609 aa12.67□□□□□ -0.38
CTNNA1-234ENST00000522227 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 C2CD2LO14523 706 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 INPPL1O15357 1258 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 C15orf39Q6ZRI6 1047 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 PRR23CQ6ZRP0 262 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 KIAA0319LQ8IZA0 1049 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 MTMR8Q96EF0 704 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 EMILIN2Q9BXX0 1053 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 RNF41Q9H4P4 317 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 WDR6Q9NNW5 1121 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 SEMA4GQ9NTN9 838 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 EPS15L1Q9UBC2 864 aa12.66□□□□□ -0.38
CTNNA1-234ENST00000522227 LAMA4Q16363 1823 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 PATJQ8NI35 1801 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 A0A0D9SFI3 127 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 RFPL2O75678 378 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 SPATA31D3P0C874 917 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 GIT2Q14161 759 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 MLF2Q15773 248 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 NXPE3Q969Y0 559 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 BORCS6Q96GS4 357 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 IGSF21Q96ID5 467 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 PIDD1Q9HB75 910 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 SLC2A4RGQ9NR83 387 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 INPP5FQ9Y2H2 1132 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 IRAK3Q9Y616 596 aa12.65□□□□□ -0.38
CTNNA1-234ENST00000522227 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 LAMP2P13473 410 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 ITGB5P18084 799 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 FGFR4P22455 802 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 STAT5BP51692 787 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 POLGP54098 1239 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 SHC2P98077 582 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 HTR4Q13639 388 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 CCDC178Q5BJE1 867 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 LAIR1Q6GTX8 287 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 CUL5Q93034 780 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms