RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 ADAT2Q7Z6V5 191 aaKnown RBP13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 ATP6V0A4Q9HBG4 840 aa13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
PCDHGA6-201ENST00000517434 F5H6K3 240 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 MMP1P03956 469 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 CACNB3P54284 484 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 RAD23BP54727 409 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 MYL7Q01449 175 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 KLRC3Q07444 240 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 DSTYKQ6XUX3 929 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 PRPF31Q8WWY3 499 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 RSAD2Q8WXG1 361 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 DISC1Q9NRI5 854 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 PLAAQ9Y263 795 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 ADGRB1O14514 1584 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 A6NJR5 290 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 ORC4O43929 436 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 FKBP3Q00688 224 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 C1orf228Q6PIY5 440 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 MAPK6Q16659 721 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 EXOC3L4Q17RC7 722 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 MMEL1Q495T6 779 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 SYT2Q8N9I0 419 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 GJA10Q969M2 543 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 CACYBPQ9HB71 228 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 GYG2O15488 501 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 KLC1Q07866 573 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 FAM186BQ8IYM0 893 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 CYTH2Q99418 400 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 SERPINI1Q99574 410 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 PITPNM3Q9BZ71 974 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 FAM49AQ9H0Q0 323 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 SLC4A7Q9Y6M7 1214 aa13.13□□□□□ -0.31
PCDHGA6-201ENST00000517434 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 COG1Q8WTW3 980 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 DIP2BQ9P265 1576 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 INHBAP08476 426 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 SCRN1Q12765 414 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 SCYL2Q6P3W7 929 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 RNF139Q8WU17 664 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 TTC1Q99614 292 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 VPS33BQ9H267 617 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 TEX9Q8N6V9 391 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 GCOM2Q9BZD3 368 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 TMEM60Q9H2L4 133 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 GPC4O75487 556 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 KCNJ6P48051 423 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 NEK2P51955 445 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 PRPSAP1Q14558 356 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 PTPROQ16827 1216 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 ELP3Q9H9T3 547 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 PPP2R3BQ9Y5P8 575 aa13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
PCDHGA6-201ENST00000517434 ANO9A1A5B4 782 aa13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 HNRNPH1P31943 449 aaKnown RBP13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 SLCO1A2P46721 670 aa13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 GMPSP49915 693 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 ZBED6P86452 979 aa13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 VIPAS39Q9H9C1 493 aa13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 GGA3Q9NZ52 723 aa13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
PCDHGA6-201ENST00000517434 CCDC188H7C350 402 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms