RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 FAM13AO94988 1023 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 FSBPO95073 299 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 SOX5P35711 763 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 RBM5P52756 815 aaKnown RBP eCLIP20.22■□□□□ 0.83
SCARB2-203ENST00000502908 KLRC3Q07444 240 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 IFFO1Q0D2I5 559 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 CCDC13Q8IYE1 715 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 UHMK1Q8TAS1 419 aaKnown RBP20.22■□□□□ 0.83
SCARB2-203ENST00000502908 ATP8B4Q8TF62 1192 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 RAPGEF5Q92565 580 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 METTL14Q9HCE5 456 aaKnown RBP20.22■□□□□ 0.83
SCARB2-203ENST00000502908 OPLAHO14841 1288 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 FERP16591 822 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 AP3B2Q13367 1082 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 VPS72Q15906 364 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
SCARB2-203ENST00000502908 FBXO11Q86XK2 927 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 BORCS6Q96GS4 357 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 COG5Q9UP83 839 aa20.22■□□□□ 0.83
SCARB2-203ENST00000502908 TMEM110-MUSTN1A8MSY1 372 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 BHMG1C9JSJ3 638 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-203ENST00000502908 DDX3YO15523 660 aaKnown RBP20.21■□□□□ 0.83
SCARB2-203ENST00000502908 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 IBSPP21815 317 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-203ENST00000502908 ICA1Q05084 483 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 MKRN4PQ13434 485 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-203ENST00000502908 Q4G0T1 1027 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 SYCE1Q8N0S2 351 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 SLC30A5Q8TAD4 765 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 TEKT1Q969V4 418 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 DYDC2Q96IM9 177 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 GPR88Q9GZN0 384 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 DBNDD1Q9H9R9 158 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 CD248Q9HCU0 757 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 UBAP1LF5GYI3 381 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 CAND2O75155 1236 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 FMO5P49326 533 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 RUFY4Q6ZNE9 571 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 MAEAQ7L5Y9 396 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 BANK1Q8NDB2 785 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 C1orf131Q8NDD1 294 aaKnown RBP20.21■□□□□ 0.83
SCARB2-203ENST00000502908 CTNNBL1Q8WYA6 563 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-203ENST00000502908 ALG3Q92685 438 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 FMO2Q99518 471 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 COA1Q9GZY4 146 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 SLITRK6Q9H5Y7 841 aa20.21■□□□□ 0.83
SCARB2-203ENST00000502908 G3V3G9 751 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 SLC16A3O15427 465 aaKnown RBP20.2■□□□□ 0.82
SCARB2-203ENST00000502908 CLSTN1O94985 981 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 SREBF1P36956 1147 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 POU5F1Q01860 360 aaKnown RBP20.2■□□□□ 0.82
SCARB2-203ENST00000502908 BMT2Q1RMZ1 405 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 DCAF8Q5TAQ9 597 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 CABS1Q96KC9 395 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 PNMA2Q9UL42 364 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 SNX24Q9Y343 169 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 ATXN2Q99700 1313 aaKnown RBP20.2■□□□□ 0.82
SCARB2-203ENST00000502908 TLDC2A0PJX2 215 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 PSMC2P35998 433 aaKnown RBP20.2■□□□□ 0.82
SCARB2-203ENST00000502908 MARCKSL1P49006 195 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 PLTPP55058 493 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 JAG1P78504 1218 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 LLGL1Q15334 1064 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 C6orf89Q6UWU4 347 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 SLC20A1Q8WUM9 679 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCARB2-203ENST00000502908 RFFLQ8WZ73 363 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
SCARB2-203ENST00000502908 A0A0A6YYK5 440 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-203ENST00000502908 EYA4O95677 639 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 NDUFB10O96000 172 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 KRT13P13646 458 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 CRKP46108 304 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 DR1Q01658 176 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 BIRC3Q13489 604 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 ZNF746Q6NUN9 644 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-203ENST00000502908 SH3BP5LQ7L8J4 393 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 SPATS2Q86XZ4 545 aaKnown RBP20.19■□□□□ 0.82
SCARB2-203ENST00000502908 PAGR1Q9BTK6 254 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 WDR18Q9BV38 432 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 GLT8D2Q9H1C3 349 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 GREB1LQ9C091 1923 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-203ENST00000502908 TISP43B9A030 160 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 ACTN3Q08043 901 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-203ENST00000502908 MTMR3Q13615 1198 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 CCDC121Q6ZUS5 278 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 DCAF4Q8WV16 495 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 C18orf8Q96DM3 657 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 VCPKMTQ9H867 229 aa20.19■□□□□ 0.82
SCARB2-203ENST00000502908 WRAP73Q9P2S5 460 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-203ENST00000502908 GOLGA6L7A0A1B0GV03 622 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 DNM1LO00429 736 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 MOXD1Q6UVY6 613 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 EIF1ADQ8N9N8 165 aaKnown RBP20.18■□□□□ 0.82
SCARB2-203ENST00000502908 SEC16BQ96JE7 1060 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 SLITRK3O94933 977 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 CFBP00751 764 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 PPATQ06203 517 aa20.18■□□□□ 0.82
SCARB2-203ENST00000502908 BYSLQ13895 437 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms